[adegenet-forum] supplementary individual analyses: install devol error

[Thibaut Jombart]

Can you post an issue on github, copy-paste the results of the install, and
add your session info?

Best

Thibaut


--
Dr Thibaut Jombart
Lecturer, Department of Infectious Disease Epidemiology, Imperial College
London
Head of RECON: repidemicsconsortium.org
sites.google.com/site/thibautjombart/
github.com/thibautjombart
Twitter: @TeebzR <http://twitter.com/TeebzR>
+44(0)20 7594 3658

On 24 April 2017 at 15:58, Andres, Jose <jose.andres at usask.ca> wrote:

> Hi Thibaut,
>
> I Just tried to install devtools from my Xquartz (i.e. X11) using a
> vanilla R (3.4.0) session. Unfortunately, I still get the same error. Any
> thoughts?
>
>
> Thanks a lot!
>
> /Jose
>
>
> ------------------------------
> *From:* Thibaut Jombart <thibautjombart at gmail.com>
> *Sent:* Monday, April 24, 2017 7:27 AM
> *To:* Andres, Jose
> *Cc:* adegenet-forum at lists.r-forge.r-project.org
> *Subject:* Re: [adegenet-forum] supplementary individual analyses:
> install devol error
>
> Hi Jose
>
> this looks like a devtools issue. Can you please try with the current
> version of R, using a vanilla session (R --vanilla)?
>
> Best
> Thibaut
>
>
> --
> Dr Thibaut Jombart
> Lecturer, Department of Infectious Disease Epidemiology, Imperial College
> London
> Head of RECON: repidemicsconsortium.org
> sites.google.com/site/thibautjombart/
> github.com/thibautjombart
> Twitter: @TeebzR <http://twitter.com/TeebzR>
> +44(0)20 7594 3658 <+44%2020%207594%203658>
>
> On 21 April 2017 at 20:22, Andres, Jose <jose.andres at usask.ca> wrote:
>
>> Hi there,
>> I am working on the assignment of supplementary individuals to one of
>> my previous DAPC analyses. Because the know issues with the predict.dapc of
>> the repository version (2.0.1) I'd like to use the devol version of
>> Adegenet. Unfortunately, my compilation fails because of the following
>> error:
>>
>> invalid active developer path (/Library/Developer/CommandLineTools),
>> missing xcrun at: /Library/Developer/CommandLin site:
>> lists.r-forge.r-project.org/pipermail/adegenet-forum/
>>
>> ERROR: compilation failed for package ‘adegenet’
>> * removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/
>> library/adegenet’
>> * restoring previous ‘/Library/Frameworks/R.framewo
>> rk/Versions/3.3/Resources/library/adegenet’
>>
>> Any suggestions on how to fix this? I am using R 3.3.2 GUI 1.68 Mavericks
>> build (7288) under a MacOC Sierra 10.12
>>
>> Thanks!
>>
>>
>> /Jose Andres
>>
>> _______________________________________________
>> adegenet-forum mailing list
>> adegenet-forum at lists.r-forge.r-project.org
>> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo
>> /adegenet-forum
>>
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/adegenet-forum/attachments/20170424/31079640/attachment-0001.html>