[adegenet-forum] PCoA

[Max Williams]

Dear All

I have recently used PCoA in adegenet to produce the following graph, using
the s.class function (shown in attachment). Once i defined my PCoA data as
the variable "pca.kelp" i inputted this into adegenet:

s.class(pca.cows$li, fac=pop(microbov), col=funky(15))

s.class(pca.kelp$li, fac=pop(genind1),
   +col=transp(funky(15),.6),
   +axesel=FALSE, cstar=0, cpoint=3)

I am fairly new to R statistics and would appreciate your time.

Many thanks
Max
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