[adegenet-forum] Squared distance between groups

[Thibaut Jombart]

I would use go for:
- dist.genpop
- various measures of pairwise Fst in hierfstat

Best
Thibaut

--
Dr Thibaut Jombart
Lecturer, Department of Infectious Disease Epidemiology, Imperial College London
Head of RECON: repidemicsconsortium.org
sites.google.com/site/thibautjombart/
github.com/thibautjombart
Twitter: @TeebzR


On 2 November 2016 at 17:41, John Kronenberger <j.kro365 at gmail.com> wrote:
> Hey there,
>
> I'm aware of the mstree argument, but is there any way to output the squared
> distance between groups? For example, if I'm interested in the relative
> similarity between each group.
>
> Best,
>
> John
>
> --
> John A. Kronenberger
> Master's Student and Teaching Assistant
> Graduate Degree Program in Ecology
> Department of Biology
> Colorado State University
> johnkronenberger.weebly.com
>
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