[adegenet-forum] scatter.dapc function plots only density of individuals

[Emiliano Trucchi]

Hi,

You are right. There are only two groups.
Thanks for clarifying.

Best,
Emiliano

On Wed, Dec 10, 2014 at 4:32 PM, Jombart, Thibaut <t.jombart at imperial.ac.uk>
wrote:

>  Hello,
>
> I am guessing you have only two groups, in which case there is only one
> discriminant function for your dataset. Hence the 1-dimensional, density
> plot. Otherwise, you can select which axis is plotted using the arguments
> xax and yax.
>
> Cheers
> Thibaut
>
>
> ==============================
> Dr Thibaut Jombart
> MRC Centre for Outbreak Analysis and Modelling
> Department of Infectious Disease Epidemiology
> Imperial College - School of Public Health
> Norfolk Place, London W2 1PG, UK
> Tel. : 0044 (0)20 7594 3658
> http://sites.google.com/site/thibautjombart/
> http://sites.google.com/site/therepiproject/
> http://adegenet.r-forge.r-project.org/
> Twitter: @thibautjombart
>   ------------------------------
> *From:* adegenet-forum-bounces at lists.r-forge.r-project.org [
> adegenet-forum-bounces at lists.r-forge.r-project.org] on behalf of Emiliano
> Trucchi [emi.trucchi at gmail.com]
> *Sent:* 10 December 2014 15:14
> *To:* adegenet-forum at lists.r-forge.r-project.org
> *Subject:* [adegenet-forum] scatter.dapc function plots only density of
> individuals
>
>     Hi there,
>
>  I have a basic problem with the graphic function scatter.dapc.
>  Running
>  > scatter(dapc1)
>
>  I plot the density of individuals in my groups and not the scatterplot
> as expected.
>
>  Versions: adegenet 1-4.2; R 3.1.1
>
>  Thanks in advance for the help
>  Emiliano
>
>
>
>
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