[adegenet-forum] scatter.dapc function plots only density of individuals

[Jombart, Thibaut]

Hello,

I am guessing you have only two groups, in which case there is only one discriminant function for your dataset. Hence the 1-dimensional, density plot. Otherwise, you can select which axis is plotted using the arguments xax and yax.

Cheers
Thibaut


==============================
Dr Thibaut Jombart
MRC Centre for Outbreak Analysis and Modelling
Department of Infectious Disease Epidemiology
Imperial College - School of Public Health
Norfolk Place, London W2 1PG, UK
Tel. : 0044 (0)20 7594 3658
http://sites.google.com/site/thibautjombart/
http://sites.google.com/site/therepiproject/
http://adegenet.r-forge.r-project.org/
Twitter: @thibautjombart
________________________________
From: adegenet-forum-bounces at lists.r-forge.r-project.org [adegenet-forum-bounces at lists.r-forge.r-project.org] on behalf of Emiliano Trucchi [emi.trucchi at gmail.com]
Sent: 10 December 2014 15:14
To: adegenet-forum at lists.r-forge.r-project.org
Subject: [adegenet-forum] scatter.dapc function plots only density of individuals

Hi there,

I have a basic problem with the graphic function scatter.dapc.
Running
> scatter(dapc1)

I plot the density of individuals in my groups and not the scatterplot as expected.

Versions: adegenet 1-4.2; R 3.1.1

Thanks in advance for the help
Emiliano



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