[Seqinr-forum] about read.alignment and read.fasta

THIOULOUSE JEAN Jean.Thioulouse at univ-lyon1.fr
Wed Mar 14 16:15:32 CET 2012


Did you update to the latest version of R (2.14.2) before upgrading to seqinr 3.06 ?

Jean 


Le 14 mars 2012 à 13:24, Abhijeet Shah a écrit :

> Hi seqinR users,
> 
> I had a slight problem with the commands read.alignment() and read.fasta()
> with the latest version of seqinR (version 3.06). 
> 
> whenever I use the command read.alignment
> 
>> read.alignment(file="generated_sequences.ma", format="fasta")
> Error in .Call("read_fasta_align", file, PACKAGE = "seqinr") : 
>  C symbol name "read_fasta_align" not in DLL for package "seqinr"
> 
> 
> Similarly, I get the following error with read.fasta
> 
>> read.fasta(file="generated_sequences.ma")
> Error in .Call("s2c", string, PACKAGE = "seqinr") : 
>  C symbol name "s2c" not in DLL for package "seqinr"
> 
> 
> Does anyone else have the same problems with version 3.06?
> I reverted to version 3.05, and the errors disappeared!
> 
> Please Advise.
> 
> Thank You
> 
> 
> 
> 
> Best Wishes
> Abhijeet Shah
> 
> 
> 
> 
> 
> 
> 
> Abhijeet Shah
> Munich Graduate School for Evolution, Ecology and Systematics 
> Ludwig-Maximilians-Universität München 
> email : Abhijeet.Shah at campus.lmu.de,
> email: abhijeet.shah at gmail.com
> 
> 
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