[Seqinr-forum] seqinr-forum-getOrganisms
David Lejon
dph.lejon at gmail.com
Wed Jun 24 20:14:36 CEST 2009
Dear all,
By using seqinr, I would like to create a fasta file from a list of
accession number.
So far, I do not have any problem to create the list, get the name (getName)
and the sequence (getSequence). I was just wondering if it would be
possible via seqinr
to get the organisms/taxonomy attibutes (on genbank database) in order
to have a fasta
file as below :
>Accesion_number_organisms_taxonomy
TGCAGCGCCGTCGGGTAAGACCAACTCCCATGGT
Thanks in advance
cheers
David
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