[Robast-commits] r368 - in branches/robast-0.7/pkg: ROptEst ROptEst/chm ROptEst/man ROptEstOld ROptEstOld/chm ROptRegTS RandVar RandVar/chm RandVar/man RobAStBase RobAStBase/R RobAStBase/chm RobAStBase/man RobLox RobLox/chm RobLox/man RobLoxBioC RobLoxBioC/man RobRex
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Fri Sep 4 04:34:16 CEST 2009
Author: ruckdeschel
Date: 2009-09-04 04:34:05 +0200 (Fri, 04 Sep 2009)
New Revision: 368
Modified:
branches/robast-0.7/pkg/ROptEst/DESCRIPTION
branches/robast-0.7/pkg/ROptEst/chm/ROptEst.chm
branches/robast-0.7/pkg/ROptEst/man/0ROptEst-package.Rd
branches/robast-0.7/pkg/ROptEstOld/DESCRIPTION
branches/robast-0.7/pkg/ROptEstOld/chm/ROptEstOld.chm
branches/robast-0.7/pkg/ROptRegTS/DESCRIPTION
branches/robast-0.7/pkg/RandVar/DESCRIPTION
branches/robast-0.7/pkg/RandVar/chm/RandVar.chm
branches/robast-0.7/pkg/RandVar/man/0RandVar-package.Rd
branches/robast-0.7/pkg/RobAStBase/DESCRIPTION
branches/robast-0.7/pkg/RobAStBase/R/comparePlot.R
branches/robast-0.7/pkg/RobAStBase/chm/0RobAStBase-package.html
branches/robast-0.7/pkg/RobAStBase/chm/RobAStBase.chm
branches/robast-0.7/pkg/RobAStBase/man/0RobAStBase-package.Rd
branches/robast-0.7/pkg/RobLox/DESCRIPTION
branches/robast-0.7/pkg/RobLox/chm/RobLox.chm
branches/robast-0.7/pkg/RobLox/man/0RobLox-package.Rd
branches/robast-0.7/pkg/RobLoxBioC/DESCRIPTION
branches/robast-0.7/pkg/RobLoxBioC/man/0RobLoxBioC-package.Rd
branches/robast-0.7/pkg/RobRex/DESCRIPTION
Log:
++ RobAStBase: removed some little bug in comparePlot.R
++ updated DESCRIPTION files and package-help files to date= \today
Modified: branches/robast-0.7/pkg/ROptEst/DESCRIPTION
===================================================================
--- branches/robast-0.7/pkg/ROptEst/DESCRIPTION 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/ROptEst/DESCRIPTION 2009-09-04 02:34:05 UTC (rev 368)
@@ -1,11 +1,9 @@
Package: ROptEst
Version: 0.7
-Date: 2009-07-16
+Date: 2009-09-04
Title: Optimally robust estimation
-Description: Optimally robust estimation in general smoothly
- parameterized models using S4 classes and methods.
-Depends: R(>= 2.7.0), methods, distr(>= 2.0), distrEx(>= 2.0),
- distrMod(>= 2.0), RandVar(>= 0.6.4), RobAStBase
+Description: Optimally robust estimation in general smoothly parameterized models using S4 classes and methods.
+Depends: R(>= 2.7.0), methods, distr(>= 2.0), distrEx(>= 2.0), distrMod(>= 2.0), RandVar(>= 0.6.4), RobAStBase
Author: Matthias Kohl, Peter Ruckdeschel
Maintainer: Matthias Kohl <Matthias.Kohl at stamats.de>
LazyLoad: yes
Modified: branches/robast-0.7/pkg/ROptEst/chm/ROptEst.chm
===================================================================
(Binary files differ)
Modified: branches/robast-0.7/pkg/ROptEst/man/0ROptEst-package.Rd
===================================================================
--- branches/robast-0.7/pkg/ROptEst/man/0ROptEst-package.Rd 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/ROptEst/man/0ROptEst-package.Rd 2009-09-04 02:34:05 UTC (rev 368)
@@ -11,12 +11,12 @@
}
\details{
\tabular{ll}{
-Package: \tab ROptEst\cr
+Package: \tab ROptEst \cr
Version: \tab 0.7 \cr
-Date: \tab 2009-09-02 \cr
-Depends: \tab R(>= 2.7.0), methods, distr(>= 2.0), distrEx(>= 2.0),distrMod(>= 2.0), RandVar(>= 0.6.4), RobAStBase\cr
-LazyLoad: \tab yes\cr
-License: \tab LGPL-3\cr
+Date: \tab 2009-09-04 \cr
+Depends: \tab R(>= 2.7.0), methods, distr(>= 2.0), distrEx(>= 2.0), distrMod(>= 2.0), RandVar(>= 0.6.4), RobAStBase \cr
+LazyLoad: \tab yes \cr
+License: \tab LGPL-3 \cr
URL: \tab http://robast.r-forge.r-project.org/\cr
}
}
Modified: branches/robast-0.7/pkg/ROptEstOld/DESCRIPTION
===================================================================
--- branches/robast-0.7/pkg/ROptEstOld/DESCRIPTION 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/ROptEstOld/DESCRIPTION 2009-09-04 02:34:05 UTC (rev 368)
@@ -1,8 +1,9 @@
Package: ROptEstOld
Version: 0.7
-Date: 2009-08-21
+Date: 2009-09-04
Title: Optimally robust estimation - old version
-Description: Optimally robust estimation using S4 classes and methods. Old version still needed for current versions of ROptRegTS and RobRex.
+Description: Optimally robust estimation using S4 classes and methods. Old version still needed for current versions of ROptRegTS and
+ RobRex.
Depends: R(>= 2.4.0), methods, distr(>= 2.2), distrEx(>= 2.2), RandVar(>= 0.7)
Author: Matthias Kohl
Maintainer: Matthias Kohl <Matthias.Kohl at stamats.de>
Modified: branches/robast-0.7/pkg/ROptEstOld/chm/ROptEstOld.chm
===================================================================
(Binary files differ)
Modified: branches/robast-0.7/pkg/ROptRegTS/DESCRIPTION
===================================================================
--- branches/robast-0.7/pkg/ROptRegTS/DESCRIPTION 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/ROptRegTS/DESCRIPTION 2009-09-04 02:34:05 UTC (rev 368)
@@ -1,11 +1,9 @@
Package: ROptRegTS
Version: 0.6.1
-Date: 2009-04-14
+Date: 2009-09-04
Title: Optimally robust estimation for regression-type models
-Description: Optimally robust estimation for regression-type models
- using S4 classes and methods
-Depends: R (>= 2.4.0), methods, distr(>= 1.9), distrEx(>= 1.9),
- RandVar(>= 0.6), ROptEstOld(>= 0.5.2)
+Description: Optimally robust estimation for regression-type models using S4 classes and methods
+Depends: R (>= 2.4.0), methods, distr(>= 1.9), distrEx(>= 1.9), RandVar(>= 0.6), ROptEstOld(>= 0.5.2)
Author: Matthias Kohl <Matthias.Kohl at stamats.de>, Peter Ruckdeschel
Maintainer: Matthias Kohl <Matthias.Kohl at stamats.de>
LazyLoad: yes
Modified: branches/robast-0.7/pkg/RandVar/DESCRIPTION
===================================================================
--- branches/robast-0.7/pkg/RandVar/DESCRIPTION 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RandVar/DESCRIPTION 2009-09-04 02:34:05 UTC (rev 368)
@@ -1,9 +1,8 @@
Package: RandVar
Version: 0.7
-Date: 2009-07-31
+Date: 2009-09-04
Title: Implementation of random variables
-Description: Implementation of random variables by means of S4 classes
- and methods
+Description: Implementation of random variables by means of S4 classes and methods
Depends: R (>= 2.7.0), methods, startupmsg, distr(>= 2.0), distrEx(>= 2.0)
Author: Matthias Kohl, Peter Ruckdeschel
Maintainer: Matthias Kohl <Matthias.Kohl at stamats.de>
Modified: branches/robast-0.7/pkg/RandVar/chm/RandVar.chm
===================================================================
(Binary files differ)
Modified: branches/robast-0.7/pkg/RandVar/man/0RandVar-package.Rd
===================================================================
--- branches/robast-0.7/pkg/RandVar/man/0RandVar-package.Rd 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RandVar/man/0RandVar-package.Rd 2009-09-04 02:34:05 UTC (rev 368)
@@ -10,13 +10,13 @@
}
\details{
\tabular{ll}{
-Package: \tab RandVar\cr
+Package: \tab RandVar \cr
Version: \tab 0.7 \cr
-Date: \tab 2009-04-14 \cr
+Date: \tab 2009-09-04 \cr
Depends: \tab R (>= 2.7.0), methods, startupmsg, distr(>= 2.0), distrEx(>=
2.0)\cr
-LazyLoad: \tab yes\cr
-License: \tab LGPL-3\cr
+LazyLoad: \tab yes \cr
+License: \tab LGPL-3 \cr
URL: \tab http://robast.r-forge.r-project.org/\cr
}
}
Modified: branches/robast-0.7/pkg/RobAStBase/DESCRIPTION
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/DESCRIPTION 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RobAStBase/DESCRIPTION 2009-09-04 02:34:05 UTC (rev 368)
@@ -1,11 +1,9 @@
Package: RobAStBase
Version: 0.7
-Date: 2009-07-15
+Date: 2009-09-04
Title: Robust Asymptotic Statistics
-Description: Base S4-classes and functions for robust asymptotic
- statistics.
-Depends: R(>= 2.7.0), methods, distr(>= 2.0), distrEx(>= 2.0),
- distrMod(>= 2.0), RandVar(>= 0.6.3)
+Description: Base S4-classes and functions for robust asymptotic statistics.
+Depends: R(>= 2.7.0), methods, distr(>= 2.0), distrEx(>= 2.0), distrMod(>= 2.0), RandVar(>= 0.6.3)
Author: Matthias Kohl, Peter Ruckdeschel
Maintainer: Matthias Kohl <Matthias.Kohl at stamats.de>
LazyLoad: yes
Modified: branches/robast-0.7/pkg/RobAStBase/R/comparePlot.R
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/R/comparePlot.R 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RobAStBase/R/comparePlot.R 2009-09-04 02:34:05 UTC (rev 368)
@@ -294,33 +294,43 @@
oN4 <- if(is.null(obj4)) NULL else order(aI40)
oN01 <- order(aI1)
- oN01 <- oN01[oN2 %in% which.lbs]
+ oN01 <- oN01[oN01 %in% which.lbs]
data01 <- data0[oN1]
+ aI10 <- aI1[oN1]
+
oN02 <- order(aI2)
- oN02 <- oN01[oN02 %in% which.lbs]
+ oN02 <- oN02[oN02 %in% which.lbs]
data02 <- data0[oN2]
+ aI20 <- aI2[oN2]
+
if(!is.null(obj3)){
oN03 <- order(aI3)
- oN03 <- oN01[oN03 %in% which.lbs]
+ oN03 <- oN03[oN03 %in% which.lbs]
data03 <- data0[oN3]
+ aI30 <- aI3[oN3]
}
if(!is.null(obj4)){
oN04 <- order(aI4)
- oN04 <- oN01[oN04 %in% which.lbs]
+ oN04 <- oN04[oN04 %in% which.lbs]
data04 <- data0[oN4]
+ aI40 <- aI4[oN4]
}
if(!is.null(which.Order)){
+ lD <- length(oN01)
oN1 <- oN01[lD-which.Order]
+ data01 <- data[oN1]
+ aI10 <- aI1[oN1]
+
oN2 <- oN02[lD-which.Order]
- data01 <- data[oN1]
data02 <- data[oN2]
- aI10 <- aI1[oN1]
aI20 <- aI2[oN2]
+
if(!is.null(obj3)){
oN3 <- oN03[lD-which.Order]
data03 <- data[oN3]
- aI30 <- aI1[oN3]
+ aI30 <- aI3[oN3]
}
+
if(!is.null(obj4)){
oN4 <- oN04[lD-which.Order]
data04 <- data[oN4]
Modified: branches/robast-0.7/pkg/RobAStBase/chm/0RobAStBase-package.html
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/chm/0RobAStBase-package.html 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RobAStBase/chm/0RobAStBase-package.html 2009-09-04 02:34:05 UTC (rev 368)
@@ -29,7 +29,7 @@
<table summary="Rd table">
<tr>
<td align="left">
-Package: </td><td align="left"> RobAStBase</td>
+Package: </td><td align="left"> RobAStBase </td>
</tr>
<tr>
<td align="left">
@@ -37,7 +37,7 @@
</tr>
<tr>
<td align="left">
-Date: </td><td align="left"> 2009-09-02 </td>
+Date: </td><td align="left"> 2009-09-04 </td>
</tr>
<tr>
<td align="left">
@@ -46,11 +46,11 @@
</tr>
<tr>
<td align="left">
-LazyLoad: </td><td align="left"> yes</td>
+LazyLoad: </td><td align="left"> yes </td>
</tr>
<tr>
<td align="left">
-License: </td><td align="left"> LGPL-3</td>
+License: </td><td align="left"> LGPL-3 </td>
</tr>
<tr>
<td align="left">
Modified: branches/robast-0.7/pkg/RobAStBase/chm/RobAStBase.chm
===================================================================
(Binary files differ)
Modified: branches/robast-0.7/pkg/RobAStBase/man/0RobAStBase-package.Rd
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/man/0RobAStBase-package.Rd 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RobAStBase/man/0RobAStBase-package.Rd 2009-09-04 02:34:05 UTC (rev 368)
@@ -10,13 +10,13 @@
}
\details{
\tabular{ll}{
-Package: \tab RobAStBase\cr
+Package: \tab RobAStBase \cr
Version: \tab 0.7 \cr
-Date: \tab 2009-09-02 \cr
+Date: \tab 2009-09-04 \cr
Depends: \tab R(>= 2.7.0), methods, distr(>= 2.0), distrEx(>= 2.0),
distrMod(>= 2.0), RandVar(>= 0.6.3)\cr
-LazyLoad: \tab yes\cr
-License: \tab LGPL-3\cr
+LazyLoad: \tab yes \cr
+License: \tab LGPL-3 \cr
URL: \tab http://robast.r-forge.r-project.org/\cr
}
}
Modified: branches/robast-0.7/pkg/RobLox/DESCRIPTION
===================================================================
--- branches/robast-0.7/pkg/RobLox/DESCRIPTION 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RobLox/DESCRIPTION 2009-09-04 02:34:05 UTC (rev 368)
@@ -1,9 +1,8 @@
Package: RobLox
Version: 0.7
-Date: 2009-04-21
+Date: 2009-09-04
Title: Optimally robust influence curves and estimators for location and scale
-Description: Functions for the determination of optimally robust
- influence curves and estimators in case of normal location and/or scale
+Description: Functions for the determination of optimally robust influence curves and estimators in case of normal location and/or scale
Depends: R(>= 2.7.0), stats, distrMod(>= 2.0.1), RobAStBase(>= 0.1.1)
Suggests: Biobase
Author: Matthias Kohl <Matthias.Kohl at stamats.de>
Modified: branches/robast-0.7/pkg/RobLox/chm/RobLox.chm
===================================================================
(Binary files differ)
Modified: branches/robast-0.7/pkg/RobLox/man/0RobLox-package.Rd
===================================================================
--- branches/robast-0.7/pkg/RobLox/man/0RobLox-package.Rd 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RobLox/man/0RobLox-package.Rd 2009-09-04 02:34:05 UTC (rev 368)
@@ -11,12 +11,12 @@
}
\details{
\tabular{ll}{
-Package: \tab RobLox\cr
-Version: \tab 0.7\cr
-Date: \tab 2009-04-21\cr
-Depends: \tab R(>= 2.7.0), stats, distrMod(>= 2.0.1), RobAStBase(>= 0.1.1)\cr
-LazyLoad: \tab yes\cr
-License: \tab LGPL-3\cr
+Package: \tab RobLox \cr
+Version: \tab 0.7 \cr
+Date: \tab 2009-09-04 \cr
+Depends: \tab R(>= 2.7.0), stats, distrMod(>= 2.0.1), RobAStBase(>= 0.1.1) \cr
+LazyLoad: \tab yes \cr
+License: \tab LGPL-3 \cr
URL: \tab http://robast.r-forge.r-project.org/\cr
}
}
Modified: branches/robast-0.7/pkg/RobLoxBioC/DESCRIPTION
===================================================================
--- branches/robast-0.7/pkg/RobLoxBioC/DESCRIPTION 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RobLoxBioC/DESCRIPTION 2009-09-04 02:34:05 UTC (rev 368)
@@ -1,10 +1,9 @@
Package: RobLoxBioC
Version: 0.5
-Date: 2009-04-29
+Date: 2009-09-04
Title: Infinitesimally robust estimators for preprocessing omics data
-Description: Functions for the determination of optimally robust
- influence curves and estimators for preprocessing omics data,
- in particular gene expression data.
+Description: Functions for the determination of optimally robust influence curves and estimators for preprocessing omics data, in
+ particular gene expression data.
Depends: R(>= 2.8.1), methods, Biobase, affy, beadarray, distr, RobLox, lattice, RColorBrewer
Author: Matthias Kohl <Matthias.Kohl at stamats.de>
Maintainer: Matthias Kohl <Matthias.Kohl at stamats.de>
Modified: branches/robast-0.7/pkg/RobLoxBioC/man/0RobLoxBioC-package.Rd
===================================================================
--- branches/robast-0.7/pkg/RobLoxBioC/man/0RobLoxBioC-package.Rd 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RobLoxBioC/man/0RobLoxBioC-package.Rd 2009-09-04 02:34:05 UTC (rev 368)
@@ -11,12 +11,12 @@
}
\details{
\tabular{ll}{
-Package: \tab RobLoxBioC\cr
+Package: \tab RobLoxBioC \cr
Version: \tab 0.5 \cr
-Date: \tab 2009-04-29 \cr
-Depends: \tab R (>= 2.8.1), methods, Biobase, affy, beadarray, distr, RobLox, lattice, RColorBrewer\cr
-LazyLoad: \tab yes\cr
-License: \tab LGPL-3\cr
+Date: \tab 2009-09-04 \cr
+Depends: \tab R(>= 2.8.1), methods, Biobase, affy, beadarray, distr, RobLox, lattice, RColorBrewer \cr
+LazyLoad: \tab yes \cr
+License: \tab LGPL-3 \cr
URL: \tab http://robast.r-forge.r-project.org/\cr
}
}
Modified: branches/robast-0.7/pkg/RobRex/DESCRIPTION
===================================================================
--- branches/robast-0.7/pkg/RobRex/DESCRIPTION 2009-09-03 23:27:36 UTC (rev 367)
+++ branches/robast-0.7/pkg/RobRex/DESCRIPTION 2009-09-04 02:34:05 UTC (rev 368)
@@ -1,17 +1,15 @@
Package: RobRex
Version: 0.6.1
-Date: 2009-04-14
+Date: 2009-09-04
Title: Optimally robust influence curves for regression and scale
-Description: functions for the determination of optimally robust
- influence curves in case of linear regression with unknown
- scale and standard normal distributed errors where the
- regressor is random.
+Description: functions for the determination of optimally robust influence curves in case of linear regression with unknown scale and
+ standard normal distributed errors where the regressor is random.
Depends: R (>= 2.4.0), ROptRegTS(>= 0.6.1)
Author: Matthias Kohl <Matthias.Kohl at stamats.de>
Maintainer: Matthias Kohl <Matthias.Kohl at stamats.de>
LazyLoad: yes
License: LGPL-3
Encoding: latin1
-URL: http://robast.r-forge.r-project.org/
+URL: http://robast.r-forge.r-project.org/
LastChangedDate: {$LastChangedDate$}
LastChangedRevision: {$LastChangedRevision$}
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