[Robast-commits] r367 - branches/robast-0.7/pkg/ROptEst/inst branches/robast-0.7/pkg/ROptEst/inst/scripts branches/robast-0.7/pkg/ROptEstOld branches/robast-0.7/pkg/ROptEstOld/inst branches/robast-0.7/pkg/ROptRegTS/inst branches/robast-0.7/pkg/RandVar/chm branches/robast-0.7/pkg/RandVar/inst branches/robast-0.7/pkg/RobAStBase/R branches/robast-0.7/pkg/RobAStBase/chm branches/robast-0.7/pkg/RobAStBase/inst branches/robast-0.7/pkg/RobAStBase/man branches/robast-0.7/pkg/RobLox/inst branches/robast-0.7/pkg/RobLoxBioC/inst branches/robast-0.7/pkg/RobRex/inst www
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Fri Sep 4 01:27:39 CEST 2009
Author: ruckdeschel
Date: 2009-09-04 01:27:36 +0200 (Fri, 04 Sep 2009)
New Revision: 367
Added:
branches/robast-0.7/pkg/ROptEst/inst/TOBEDONE
branches/robast-0.7/pkg/ROptEstOld/inst/
branches/robast-0.7/pkg/ROptEstOld/inst/TOBEDONE
branches/robast-0.7/pkg/ROptRegTS/inst/TOBEDONE
branches/robast-0.7/pkg/RandVar/inst/TOBEDONE
branches/robast-0.7/pkg/RobAStBase/inst/TOBEDONE
branches/robast-0.7/pkg/RobLox/inst/TOBEDONE
branches/robast-0.7/pkg/RobLoxBioC/inst/TOBEDONE
branches/robast-0.7/pkg/RobRex/inst/TOBEDONE
www/TOBEDONE
Removed:
www/ToBeDone.txt
Modified:
branches/robast-0.7/pkg/ROptEst/inst/scripts/PoissonModel.R
branches/robast-0.7/pkg/RandVar/chm/0RandVar-package.html
branches/robast-0.7/pkg/RandVar/chm/RandVar.chm
branches/robast-0.7/pkg/RobAStBase/R/AllPlot.R
branches/robast-0.7/pkg/RobAStBase/R/comparePlot.R
branches/robast-0.7/pkg/RobAStBase/R/infoPlot.R
branches/robast-0.7/pkg/RobAStBase/chm/0RobAStBase-package.html
branches/robast-0.7/pkg/RobAStBase/chm/RobAStBase.chm
branches/robast-0.7/pkg/RobAStBase/chm/comparePlot.html
branches/robast-0.7/pkg/RobAStBase/chm/infoPlot.html
branches/robast-0.7/pkg/RobAStBase/chm/plot-methods.html
branches/robast-0.7/pkg/RobAStBase/man/comparePlot.Rd
branches/robast-0.7/pkg/RobAStBase/man/infoPlot.Rd
branches/robast-0.7/pkg/RobAStBase/man/plot-methods.Rd
Log:
+added TOBEDONE (sic!) files; in English (for possible collaborators)
+merged tobedone.txt into global TOBEDONE
+new example with k=15 steps in script PoissonModel.R
+in IC - plotting methods the ordering of observations acc. to length is now descending
Added: branches/robast-0.7/pkg/ROptEst/inst/TOBEDONE
===================================================================
--- branches/robast-0.7/pkg/ROptEst/inst/TOBEDONE (rev 0)
+++ branches/robast-0.7/pkg/ROptEst/inst/TOBEDONE 2009-09-03 23:27:36 UTC (rev 367)
@@ -0,0 +1,9 @@
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+to be done in package ROptEst
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+
++ control class for controlling the IC algorithm
++ "robmlox" for multivariate location and scale
++ thorough checking & improvement of duality
+ algorithms for Hampel and (particularly) MSE
+
Modified: branches/robast-0.7/pkg/ROptEst/inst/scripts/PoissonModel.R
===================================================================
--- branches/robast-0.7/pkg/ROptEst/inst/scripts/PoissonModel.R 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/ROptEst/inst/scripts/PoissonModel.R 2009-09-03 23:27:36 UTC (rev 367)
@@ -240,6 +240,11 @@
neighbor = TotalVarNeighborhood()))
checkIC(pIC(est315))
+(est316 <- kStepEstimator(x, IC=IC14, start=est12, steps = 15L))
+ksteps(e316)
+ksteps(e316, diff = TRUE)
+
+
## comparison of estimates
estimate(est311)
estimate(est312)
@@ -257,9 +262,11 @@
## 3.2 amount of contamination unknown
IC15 <- radiusMinimaxIC(L2Fam=PoisFamily(lambda=estimate(est11)),
- neighbor=TotalVarNeighborhood(), risk=asMSE(), loRad=0, upRad=Inf)
+ neighbor=TotalVarNeighborhood(), risk=asMSE(), loRad=0,
+ upRad=Inf, loRad0 = 0.02, verbose = TRUE)
IC16 <- radiusMinimaxIC(L2Fam=PoisFamily(lambda=estimate(est12)),
- neighbor=TotalVarNeighborhood(), risk=asMSE(), loRad=0, upRad=Inf)
+ neighbor=TotalVarNeighborhood(), risk=asMSE(), loRad=0,
+ upRad=Inf, loRad0 = 0.02, verbose = TRUE)
(est321 <- oneStepEstimator(x, IC=IC15, start=est11))
kStepEstimator(x, IC=IC15, start=est11)
checkIC(pIC(est321))
Added: branches/robast-0.7/pkg/ROptEstOld/inst/TOBEDONE
===================================================================
--- branches/robast-0.7/pkg/ROptEstOld/inst/TOBEDONE (rev 0)
+++ branches/robast-0.7/pkg/ROptEstOld/inst/TOBEDONE 2009-09-03 23:27:36 UTC (rev 367)
@@ -0,0 +1,6 @@
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+to be done in package RandVar
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+
++move symmetry slots/classes out of RobAStBase into RandVar
++automatic setting of symmetry slots for specific operations
\ No newline at end of file
Added: branches/robast-0.7/pkg/ROptRegTS/inst/TOBEDONE
===================================================================
--- branches/robast-0.7/pkg/ROptRegTS/inst/TOBEDONE (rev 0)
+++ branches/robast-0.7/pkg/ROptRegTS/inst/TOBEDONE 2009-09-03 23:27:36 UTC (rev 367)
@@ -0,0 +1,3 @@
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+to be done in package ROptRegTS
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Modified: branches/robast-0.7/pkg/RandVar/chm/0RandVar-package.html
===================================================================
--- branches/robast-0.7/pkg/RandVar/chm/0RandVar-package.html 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RandVar/chm/0RandVar-package.html 2009-09-03 23:27:36 UTC (rev 367)
@@ -1,10 +1,10 @@
<html><head><title>Implementation of random variables</title>
-<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
+<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
<link rel="stylesheet" type="text/css" href="Rchm.css">
-</head>
-<body>
+</head><body>
-<table width="100%"><tr><td>RandVar-package(RandVar)</td><td align="right">R Documentation</td></tr></table><object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
+<table width="100%"><tr><td>RandVar-package(RandVar)</td><td align="right">R Documentation</td></tr></table>
+<object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
<param name="keyword" value="R: RandVar-package">
<param name="keyword" value="R: RandVar">
<param name="keyword" value=" Implementation of random variables">
@@ -24,31 +24,48 @@
<h3>Details</h3>
<p>
+
+</p>
<table summary="Rd table">
<tr>
- <td align="left">Package: </td> <td align="left"> RandVar</td>
+ <td align="left">
+Package: </td><td align="left"> RandVar</td>
</tr>
<tr>
- <td align="left"> Version: </td> <td align="left"> 0.7 </td>
+ <td align="left">
+Version: </td><td align="left"> 0.7 </td>
</tr>
<tr>
- <td align="left"> Date: </td> <td align="left"> 2009-04-14 </td>
+ <td align="left">
+Date: </td><td align="left"> 2009-04-14 </td>
</tr>
<tr>
- <td align="left"> Depends: </td> <td align="left"> R (>= 2.7.0), methods, startupmsg, distr(>= 2.0), distrEx(>= 2.0)</td>
+ <td align="left">
+Depends: </td><td align="left"> R (>= 2.7.0), methods, startupmsg, distr(>= 2.0), distrEx(>=
+2.0)</td>
</tr>
<tr>
- <td align="left"> LazyLoad: </td> <td align="left"> yes</td>
+ <td align="left">
+LazyLoad: </td><td align="left"> yes</td>
</tr>
<tr>
- <td align="left"> License: </td> <td align="left"> LGPL-3</td>
+ <td align="left">
+License: </td><td align="left"> LGPL-3</td>
</tr>
<tr>
- <td align="left"> URL: </td> <td align="left"> http://robast.r-forge.r-project.org/</td>
+ <td align="left">
+URL: </td><td align="left"> http://robast.r-forge.r-project.org/</td>
</tr>
-</table>
+<tr>
+ <td align="left">
+</td>
+</tr>
+</table><p>
+</p>
+
+
<h3>Author(s)</h3>
<p>
@@ -56,8 +73,7 @@
Matthias Kohl <a href="mailto:Matthias.Kohl at stamats.de">Matthias.Kohl at stamats.de</a><br>
</p>
<p>
-Maintainer: Matthias Kohl <a href="mailto:matthias.kohl at stamats.de">matthias.kohl at stamats.de</a>
-</p>
+Maintainer: Matthias Kohl <a href="mailto:matthias.kohl at stamats.de">matthias.kohl at stamats.de</a></p>
<h3>References</h3>
@@ -71,7 +87,7 @@
<h3>See Also</h3>
<p>
-<code><a onclick="findlink('distr', 'distr-package.html')" style="text-decoration: underline; color: blue; cursor: hand">distr-package</a></code>, <code><a onclick="findlink('distrEx', 'distrEx-package.html')" style="text-decoration: underline; color: blue; cursor: hand">distrEx-package</a></code>
+<code><a onclick="findlink('distr', '0distr-package.html')" style="text-decoration: underline; color: blue; cursor: hand">distr-package</a></code>, <code><a onclick="findlink('distrEx', '0distrEx-package.html')" style="text-decoration: underline; color: blue; cursor: hand">distrEx-package</a></code>
</p>
@@ -92,7 +108,5 @@
}
</script>
-
<hr><div align="center">[Package <em>RandVar</em> version 0.7 <a href="00Index.html">Index</a>]</div>
-
</body></html>
Modified: branches/robast-0.7/pkg/RandVar/chm/RandVar.chm
===================================================================
(Binary files differ)
Added: branches/robast-0.7/pkg/RandVar/inst/TOBEDONE
===================================================================
--- branches/robast-0.7/pkg/RandVar/inst/TOBEDONE (rev 0)
+++ branches/robast-0.7/pkg/RandVar/inst/TOBEDONE 2009-09-03 23:27:36 UTC (rev 367)
@@ -0,0 +1,2 @@
++move symmetry slots/classes out of RobAStBase into RandVar
++automatic setting of symmetry slots for specific operations
\ No newline at end of file
Modified: branches/robast-0.7/pkg/RobAStBase/R/AllPlot.R
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/R/AllPlot.R 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/R/AllPlot.R 2009-09-03 23:27:36 UTC (rev 367)
@@ -267,7 +267,7 @@
oN0 <- oN0[oN0 %in% which.lbs]
y0 <- y0[oN]
if(!is.null(which.Order)){
- oN <- oN0[which.Order]
+ oN <- oN0[(n+1)-which.Order]
y0 <- y[oN]
absInfo0 <- absInfo[oN]/max(absInfo[oN])
}
Modified: branches/robast-0.7/pkg/RobAStBase/R/comparePlot.R
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/R/comparePlot.R 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/R/comparePlot.R 2009-09-03 23:27:36 UTC (rev 367)
@@ -273,7 +273,7 @@
absInfo.f <- t(IC1) %*% QF %*% IC1
return(sapply(x, absInfo.f at Map[[1]]))}
-
+ lD <- length(data)+1
aI1 <- absInfoEval(x=data,object=obj1)
aI2 <- absInfoEval(x=data,object=obj2)
aI3 <- if(is.null(obj3)) NULL else absInfoEval(x=data,object=obj3)
@@ -310,19 +310,19 @@
data04 <- data0[oN4]
}
if(!is.null(which.Order)){
- oN1 <- oN01[which.Order]
- oN2 <- oN02[which.Order]
+ oN1 <- oN01[lD-which.Order]
+ oN2 <- oN02[lD-which.Order]
data01 <- data[oN1]
data02 <- data[oN2]
aI10 <- aI1[oN1]
aI20 <- aI2[oN2]
if(!is.null(obj3)){
- oN3 <- oN03[which.Order]
+ oN3 <- oN03[lD-which.Order]
data03 <- data[oN3]
aI30 <- aI1[oN3]
}
if(!is.null(obj4)){
- oN4 <- oN04[which.Order]
+ oN4 <- oN04[lD-which.Order]
data04 <- data[oN4]
aI40 <- aI4[oN4]
}
Modified: branches/robast-0.7/pkg/RobAStBase/R/infoPlot.R
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/R/infoPlot.R 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/R/infoPlot.R 2009-09-03 23:27:36 UTC (rev 367)
@@ -288,8 +288,8 @@
data0C <- data0[oN0Class]
if(!is.null(which.Order)){
- oN <- oN0[which.Order]
- oNC <- oN0Class[which.Order]
+ oN <- oN0[(n+1)-which.Order]
+ oNC <- oN0Class[(n+1)-which.Order]
data0 <- data[oN]
data0C <- data[oNC]
absInfo0.data <- absInfo.data[oN]
Modified: branches/robast-0.7/pkg/RobAStBase/chm/0RobAStBase-package.html
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/chm/0RobAStBase-package.html 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/chm/0RobAStBase-package.html 2009-09-03 23:27:36 UTC (rev 367)
@@ -1,10 +1,10 @@
<html><head><title>Robust Asymptotic Statistics</title>
-<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
+<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
<link rel="stylesheet" type="text/css" href="Rchm.css">
-</head>
-<body>
+</head><body>
-<table width="100%"><tr><td>RobAStBase-package(RobAStBase)</td><td align="right">R Documentation</td></tr></table><object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
+<table width="100%"><tr><td>RobAStBase-package(RobAStBase)</td><td align="right">R Documentation</td></tr></table>
+<object type="application/x-oleobject" classid="clsid:1e2a7bd0-dab9-11d0-b93a-00c04fc99f9e">
<param name="keyword" value="R: RobAStBase-package">
<param name="keyword" value="R: RobAStBase">
<param name="keyword" value=" Robust Asymptotic Statistics">
@@ -24,31 +24,48 @@
<h3>Details</h3>
<p>
+
+</p>
<table summary="Rd table">
<tr>
- <td align="left">Package: </td> <td align="left"> RobAStBase</td>
+ <td align="left">
+Package: </td><td align="left"> RobAStBase</td>
</tr>
<tr>
- <td align="left"> Version: </td> <td align="left"> 0.7 </td>
+ <td align="left">
+Version: </td><td align="left"> 0.7 </td>
</tr>
<tr>
- <td align="left"> Date: </td> <td align="left"> 2009-07-17 </td>
+ <td align="left">
+Date: </td><td align="left"> 2009-09-02 </td>
</tr>
<tr>
- <td align="left"> Depends: </td> <td align="left"> R(>= 2.7.0), methods, distr(>= 2.0), distrEx(>= 2.0), distrMod(>= 2.0), RandVar(>= 0.6.3)</td>
+ <td align="left">
+Depends: </td><td align="left"> R(>= 2.7.0), methods, distr(>= 2.0), distrEx(>= 2.0),
+distrMod(>= 2.0), RandVar(>= 0.6.3)</td>
</tr>
<tr>
- <td align="left"> LazyLoad: </td> <td align="left"> yes</td>
+ <td align="left">
+LazyLoad: </td><td align="left"> yes</td>
</tr>
<tr>
- <td align="left"> License: </td> <td align="left"> LGPL-3</td>
+ <td align="left">
+License: </td><td align="left"> LGPL-3</td>
</tr>
<tr>
- <td align="left"> URL: </td> <td align="left"> http://robast.r-forge.r-project.org/</td>
+ <td align="left">
+URL: </td><td align="left"> http://robast.r-forge.r-project.org/</td>
</tr>
-</table>
+<tr>
+ <td align="left">
+</td>
+</tr>
+</table><p>
+</p>
+
+
<h3>Author(s)</h3>
<p>
@@ -56,8 +73,7 @@
Matthias Kohl <a href="mailto:Matthias.Kohl at stamats.de">Matthias.Kohl at stamats.de</a><br>
</p>
<p>
-Maintainer: Matthias Kohl <a href="mailto:matthias.kohl at stamats.de">matthias.kohl at stamats.de</a>
-</p>
+Maintainer: Matthias Kohl <a href="mailto:matthias.kohl at stamats.de">matthias.kohl at stamats.de</a></p>
<h3>References</h3>
@@ -100,7 +116,5 @@
}
</script>
-
<hr><div align="center">[Package <em>RobAStBase</em> version 0.7 <a href="00Index.html">Index</a>]</div>
-
</body></html>
Modified: branches/robast-0.7/pkg/RobAStBase/chm/RobAStBase.chm
===================================================================
(Binary files differ)
Modified: branches/robast-0.7/pkg/RobAStBase/chm/comparePlot.html
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/chm/comparePlot.html 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/chm/comparePlot.html 2009-09-03 23:27:36 UTC (rev 367)
@@ -154,7 +154,7 @@
to be plotted into graph or <code>NULL</code> — then no observation is excluded</td></tr>
<tr valign="top"><td><code>which.Order</code></td>
<td>
-for each of the given ICs, we order the observations
+for each of the given ICs, we order the observations (descending)
according to the norm given by the corresponding <code>normtype(object)</code>;
then <code>which.Order</code> either is an integer vector with the indices of the <EM>ordered</EM>
observations (remaining after a possible reduction by argument <code>which.lbs</code>)
Modified: branches/robast-0.7/pkg/RobAStBase/chm/infoPlot.html
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/chm/infoPlot.html 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/chm/infoPlot.html 2009-09-03 23:27:36 UTC (rev 367)
@@ -160,7 +160,7 @@
to be plotted into graph or <code>NULL</code> — then no observation is excluded</td></tr>
<tr valign="top"><td><code>which.Order</code></td>
<td>
-we order the observations according to the norm given by
+we order the observations (descending) according to the norm given by
<code>normtype(object)</code>; then <code>which.Order</code>
either is an integer vector with the indices of the <EM>ordered</EM>
observations (remaining after a possible reduction by argument <code>which.lbs</code>)
Modified: branches/robast-0.7/pkg/RobAStBase/chm/plot-methods.html
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/chm/plot-methods.html 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/chm/plot-methods.html 2009-09-03 23:27:36 UTC (rev 367)
@@ -127,7 +127,7 @@
to be plotted into graph or <code>NULL</code> — then no observation is excluded</td></tr>
<tr valign="top"><td><code>which.Order</code></td>
<td>
-we order the observations according to the norm given by
+we order the observations (descending) according to the norm given by
<code>normtype(object)</code>; then <code>which.Order</code>
either is an integer vector with the indices of the <EM>ordered</EM>
observations (remaining after a possible reduction by argument <code>which.lbs</code>)
Added: branches/robast-0.7/pkg/RobAStBase/inst/TOBEDONE
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/inst/TOBEDONE (rev 0)
+++ branches/robast-0.7/pkg/RobAStBase/inst/TOBEDONE 2009-09-03 23:27:36 UTC (rev 367)
@@ -0,0 +1,23 @@
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+to be done in package RobAStBase
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+
++ model diagnostics: qqplot adapted for robust model fits
+ (choose color of plots according to robust distances)
+ (see distrMod for further ideas)
+
++ MEstimator (repeats k-steps until convergence)
+
++ S4 class(es) for slot Risk, with corresponding scalable output
+
++ generic treatment of data import by some generic
+ "prepare" function which does
+ * cleaning from missings
+ * coerce to standard data format
+
++ more scalable output of one/kStepEstimator
++ include breakdown point information if available
+
++ bootstrap facilities for finite sample variances for kStep oneStep
+
++ bootstrap confidence methods
\ No newline at end of file
Modified: branches/robast-0.7/pkg/RobAStBase/man/comparePlot.Rd
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/man/comparePlot.Rd 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/man/comparePlot.Rd 2009-09-03 23:27:36 UTC (rev 367)
@@ -77,7 +77,7 @@
for plotting points of the \code{data} argument in a jittered fashion.}
\item{which.lbs}{either an integer vector with the indices of the observations
to be plotted into graph or \code{NULL} --- then no observation is excluded}
- \item{which.Order}{for each of the given ICs, we order the observations
+ \item{which.Order}{for each of the given ICs, we order the observations (descending)
according to the norm given by the corresponding \code{normtype(object)};
then \code{which.Order} either is an integer vector with the indices of the \emph{ordered}
observations (remaining after a possible reduction by argument \code{which.lbs})
Modified: branches/robast-0.7/pkg/RobAStBase/man/infoPlot.Rd
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/man/infoPlot.Rd 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/man/infoPlot.Rd 2009-09-03 23:27:36 UTC (rev 367)
@@ -82,7 +82,7 @@
for plotting points of the \code{data} argument in a jittered fashion.}
\item{which.lbs}{either an integer vector with the indices of the observations
to be plotted into graph or \code{NULL} --- then no observation is excluded}
- \item{which.Order}{we order the observations according to the norm given by
+ \item{which.Order}{we order the observations (descending) according to the norm given by
\code{normtype(object)}; then \code{which.Order}
either is an integer vector with the indices of the \emph{ordered}
observations (remaining after a possible reduction by argument \code{which.lbs})
Modified: branches/robast-0.7/pkg/RobAStBase/man/plot-methods.Rd
===================================================================
--- branches/robast-0.7/pkg/RobAStBase/man/plot-methods.Rd 2009-09-03 10:50:14 UTC (rev 366)
+++ branches/robast-0.7/pkg/RobAStBase/man/plot-methods.Rd 2009-09-03 23:27:36 UTC (rev 367)
@@ -62,7 +62,7 @@
for plotting points of the second argument in a jittered fashion.}
\item{which.lbs}{either an integer vector with the indices of the observations
to be plotted into graph or \code{NULL} --- then no observation is excluded}
- \item{which.Order}{we order the observations according to the norm given by
+ \item{which.Order}{we order the observations (descending) according to the norm given by
\code{normtype(object)}; then \code{which.Order}
either is an integer vector with the indices of the \emph{ordered}
observations (remaining after a possible reduction by argument \code{which.lbs})
Added: branches/robast-0.7/pkg/RobLox/inst/TOBEDONE
===================================================================
--- branches/robast-0.7/pkg/RobLox/inst/TOBEDONE (rev 0)
+++ branches/robast-0.7/pkg/RobLox/inst/TOBEDONE 2009-09-03 23:27:36 UTC (rev 367)
@@ -0,0 +1,4 @@
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+to be done in package RobLox
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
++ideas for robmlox?
\ No newline at end of file
Added: branches/robast-0.7/pkg/RobLoxBioC/inst/TOBEDONE
===================================================================
--- branches/robast-0.7/pkg/RobLoxBioC/inst/TOBEDONE (rev 0)
+++ branches/robast-0.7/pkg/RobLoxBioC/inst/TOBEDONE 2009-09-03 23:27:36 UTC (rev 367)
@@ -0,0 +1,3 @@
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+to be done in package RobLoxBioC
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Added: branches/robast-0.7/pkg/RobRex/inst/TOBEDONE
===================================================================
--- branches/robast-0.7/pkg/RobRex/inst/TOBEDONE (rev 0)
+++ branches/robast-0.7/pkg/RobRex/inst/TOBEDONE 2009-09-03 23:27:36 UTC (rev 367)
@@ -0,0 +1,4 @@
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+to be done in package RobRex
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
++formula interface
\ No newline at end of file
Added: www/TOBEDONE
===================================================================
--- www/TOBEDONE (rev 0)
+++ www/TOBEDONE 2009-09-03 23:27:36 UTC (rev 367)
@@ -0,0 +1,72 @@
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+to be done in packages in RobASt Family of packages
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+
++general treatment of scripts
++produce automatic pdf out of result for later reference
++!!! unit tests -> comparison with former values.
+
++stricter use of encapsulation
+
+
+###########################################################
+## Testing existing code
+###########################################################
+possibilities:
+1) compare section 1.1.3 in Writing R extensions
+-> subfolder tests with .R (oder .Rin) and corresponding .Rout.save files
+-> possibly subfolder tests/Examples with file "pkg"-Ex.Rout.save for
+ checking examples
+
+2) Package RUnit:
+ Standard Unit Testing framework, with additional code inspection
+ and report generation tools
+
+3) Package svUnit:
+ A complete unit test system and functions to implement its GUI part
+
+
+###########################################################
+## S4 classe(s) with control structures
+###########################################################
+examples:
+- managing tuning parameters for optimization O
+- control of intermediate output - refined verbose
+ possibilities for degrees of detailedness:
+ -> simple progress bar (with possibly estimated time ahead)
+ -> detailed output of intermediate results
+
+
+###########################################################
+## S4 class for Risks slot in class InfluenceCurve
+###########################################################
+- up to now use list
+- Problem: no clear-cut structure
+
+
+###########################################################
+## RandVar: Symmetry properties
+###########################################################
+- Move symmetry properties from RobAStBase to RandVar
+- check operations acting on RVs whether they retain/generate
+ symmetry
+
+###########################################################
+## Bootstrap (RobAStBase)
+###########################################################
+- for approximation of finite-sample covariance / confidence intervals
+- in particular for getting this information in case p<k for k-space
+
+
+###########################################################
+## Model diagnostics resp. robust model diagnostics
+###########################################################
+- qq-Plot mit coloring suspicious value
+
+
+###########################################################
+## k-Step Estimation
+###########################################################
+- graphical display for pICList
+- (more complete) adjustment RobLox for new slots of kStepEstimate
+
Deleted: www/ToBeDone.txt
===================================================================
--- www/ToBeDone.txt 2009-09-03 10:50:14 UTC (rev 366)
+++ www/ToBeDone.txt 2009-09-03 23:27:36 UTC (rev 367)
@@ -1,64 +0,0 @@
-###############################################################################
-## RobASt-project: next steps / to be done
-###############################################################################
-
-###########################################################
-## Testen des vorhandenen Codes
-###########################################################
-Möglichkeiten:
-1) vgl. Abschnitt 1.1.3 in Writing R extensions
--> Unterordner tests mit .R (oder .Rin) und zugehörigen .Rout.save Dateien
--> evtl. Unterordner tests/Examples mit Datei "pkg"-Ex.Rout.save zur
- Überprüfung der Beispiele
-
-2) Paket RUnit: Standard Unit Testing framework, with additional code inspection
-and report generation tools
-
-3) Paket svUnit: A complete unit test system and functions to implement its
-GUI part
-
-
-###########################################################
-## S4 Klasse(n) mit Kontrollstrukturen
-###########################################################
-Beispiele:
-- welcher Optimierungsalgorithmus mit welchen Parametern bei Verwendung
- von optim
-- Steuerung von Zwischenausgaben - verfeinertes verbatim (von einem einfachen
- Fortschrittsbalken bis hin zu detailierten Ausgaben von Zwischenergebnissen)
-- evtl. geschätzte Restdauer
-
-
-###########################################################
-## S4 Klasse für Risks slot von Klasse InfluenceCurve
-###########################################################
-- bisher Verwendung von list
-- Problem: keine klare Struktur
-
-
-###########################################################
-## RandVar: Symmetrieeigenschaften
-###########################################################
-- Einführen von Symmetrieeigenschaften im Paket RandVar
-- Operationen, die symmetrieerhaltend sind
-
-
-###########################################################
-## Bootstrap zur Bestimmung der Kovarianz
-###########################################################
-- Zur Approximation der finite-sample Kovarianz
-- insbesondere im Fall, dass nicht der volle Parameter geschätzt wird - jedoch
- die Kovarianz für den vollen Parameter benötigt wird
-
-
-###########################################################
-## Modelldiagnostik bzw. robuste Modelldiagnostik
-###########################################################
-- qq-Plot mit Einfärbung auffälliger Werte
-
-
-###########################################################
-## k-Schritt Schätzung
-###########################################################
-- graphische Darstellung der Folge der ICs aus den k Schritten
-- RobLox anpassen an neue Implementation
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