[Biomod-commits] Projection Error (sum (ProbData) !=0)

[David Roberts]

Update: model projections run smoothly when "FDA=F". Perhaps I am missing an
FDA setting? Using "MDA=T" instead (on a hunch) returns an unused argument
error on MDA=T. For the record, the model built smoothly with FDA=T.

 

Apologies if you know this already and I missed a previous string. 

 

-          DR

 

________________________

 

David Roberts

PhD Student

Dept. of Renewable Resources

University of Alberta

(780) 492-2540

 <mailto:drr3 at ualberta.ca> drr3 at ualberta.ca

 

From: David Roberts [mailto:drr3 at ualberta.ca] 
Sent: Wednesday, June 16, 2010 11:31 AM
To: 'biomod-commits at lists.r-forge.r-project.org'
Subject: Projection Error (sum (ProbData) !=0)

 

Greetings all,

 

I've been playing with BIOMOD for a while and think I have it all sorted
out, but I see that this error has come up before. I'm running a species
projection with all available model types for a total of 21 species. The
first three species run smoothly, but I hit this familiar error:

 

Input:

Projection(Proj=proj, Proj.name='FIAusa', GLM=T, GBM=T, GAM=T, CTA=T, ANN=T,
SRE=T, FDA=T, MARS=T, RF=T, BinRoc=T, BinKappa=T, BinTSS=T, FiltRoc=T,
FiltKappa=T, FiltTSS=T, repetition.models=T)

 

Output (after listing 3 successful species projections):

Error in if (sum(ProbData) != 0) { :

  missing value where TRUE/FALSE needed

 

If there's a code setting or otherwise that might be generating this, please
do let me know. Just to clarify, I'm not running an ensemble yet, just a
regular projection. I would normally be scouring my data file for an issue,
but since the first few species run fine, I'm confident that it's clean.

 

R is running on a 64-bit Linux machine, if that makes any difference.

 

Thanks everyone!

 

-          David

 

________________________

 

David Roberts

PhD Student

Dept. of Renewable Resources

University of Alberta

(780) 492-2540

drr3 at ualberta.ca

 

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