[adegenet-forum] problem installation adegenet Ubuntu

[Zhian N. Kamvar]

You might try the solutions in this thread: 
https://github.com/vegandevs/vegan/issues/365


> Date: Fri, 2 Oct 2020 15:23:51 +0200
> From: Didier AURELLE <didier.aurelle at mio.osupytheas.fr>
> To: Roman Luštrik <roman.lustrik at biolitika.si>
> Cc: adegenet-forum <adegenet-forum at lists.r-forge.r-project.org>
> Subject: Re: [adegenet-forum] problem installation adegenet Ubuntu
> Message-ID: <a690508e-981f-9df6-a875-12e27615e276 at mio.osupytheas.fr>
> Content-Type: text/plain; charset="utf-8"; Format="flowed"
>
> Hi Roman
>
> I tried to do this, apparently it was already installed, and I still get
> the same error
>
> thanks
>
> Didier
>
>
> Le 02/10/2020 à 12:07, Roman Luštrik a écrit :
>> Did you install essential tools for building?
>>
>> sudo apt install build-essential
>>
>> Cheers,
>> Roman
>>
>> ---
>> “If we have data, let’s look at data. If all we have are opinions,
>> let’s go with mine.” -- Jim Barksdale
>>
>>
>>
>> ---- On Fri, 02 Oct 2020 11:35:52 +0200 *Didier AURELLE
>> <didier.aurelle at mio.osupytheas.fr
>> <mailto:didier.aurelle at mio.osupytheas.fr>>* wrote ----
>>
>>      Dear all,
>>
>>
>>      I tried to install adegenet on R version 3.6.3 on Ubuntu 20.04.1
>>      with RStudio
>>
>>      I used the command :
>>
>>      install_github("thibautjombart/adegenet")
>>
>>
>>      I first got an error that libgfortran.so.4 was not found so I
>>      created a symbolic link toward libgfortran.so.5 which was present
>>      in /usr/lib/x86_64-linux-gnu
>>
>>
>>      Then I got a new error :
>>
>>      usr/lib/x86_64-linux-gnu/libgfortran.so.5: version `GFORTRAN_7'
>>      not found (required by
>>      /home/aurelle/R/x86_64-pc-linux-gnu-library/3.6/vegan/libs/vegan.so)
>>
>>
>>      If I type in a terminal
>>
>>      gfortran - - version
>>
>>
>>      I get
>>
>>      GNU Fortran (Ubuntu 9.3.0-10ubuntu2) 9.3.0
>>
>>
>>      So I don’t know what to do. Do you have any idea ?
>>
>>
>>      Thanks
>>
>>      Didier
>>
>>
>>
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>>
>>