[adegenet-forum] problem installation adegenet Ubuntu

[Didier AURELLE]

Hi Roman

I tried to do this, apparently it was already installed, and I still get 
the same error

thanks

Didier


Le 02/10/2020 à 12:07, Roman Luštrik a écrit :
> Did you install essential tools for building?
>
> sudo apt install build-essential
>
> Cheers,
> Roman
>
> ---
> “If we have data, let’s look at data. If all we have are opinions, 
> let’s go with mine.” -- Jim Barksdale
>
>
>
> ---- On Fri, 02 Oct 2020 11:35:52 +0200 *Didier AURELLE 
> <didier.aurelle at mio.osupytheas.fr 
> <mailto:didier.aurelle at mio.osupytheas.fr>>* wrote ----
>
>     Dear all,
>
>
>     I tried to install adegenet on R version 3.6.3 on Ubuntu 20.04.1
>     with RStudio
>
>     I used the command :
>
>     install_github("thibautjombart/adegenet")
>
>
>     I first got an error that libgfortran.so.4 was not found so I
>     created a symbolic link toward libgfortran.so.5 which was present
>     in /usr/lib/x86_64-linux-gnu
>
>
>     Then I got a new error :
>
>     usr/lib/x86_64-linux-gnu/libgfortran.so.5: version `GFORTRAN_7'
>     not found (required by
>     /home/aurelle/R/x86_64-pc-linux-gnu-library/3.6/vegan/libs/vegan.so)
>
>
>     If I type in a terminal
>
>     gfortran - - version
>
>
>     I get
>
>     GNU Fortran (Ubuntu 9.3.0-10ubuntu2) 9.3.0
>
>
>     So I don’t know what to do. Do you have any idea ?
>
>
>     Thanks
>
>     Didier
>
>
>
>     _______________________________________________
>     adegenet-forum mailing list
>     adegenet-forum at lists.r-forge.r-project.org
>     <mailto:adegenet-forum at lists.r-forge.r-project.org>
>     https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/adegenet-forum
>
>
>
-- 

*Didier AURELLE*

*Courriel: didier.aurelle(at)univ-amu.fr / 
didier.aurelle(at)mio.osupytheas.fr*

Maître de Conférences
*Aix-Marseille Université / Institut Pythéas*
MIO / Institut Méditerranéen d'Océanologie 
<https://www.mio.univ-amu.fr/> UMR AMU / CNRS / IRD

Campus de Luminy – OCEANOMED
Bâtiment Pacifique
13288 MARSEILLE cedex 09 FRANCE

Campus de Luminy <https://goo.gl/maps/rQKMDJFMpFu>


Tel: + 33 4 86 09 06 22

http://didier.aurelle.perso.luminy.univ-amu.fr/

The ADACNI project
http://adacni.imbe.fr <http://adacni.imbe.fr/>

The HOLODIV project
https://holodiv.mio.osupytheas.fr/



-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/adegenet-forum/attachments/20201002/2d76d136/attachment.html>