[adegenet-forum] Question about DAPC clustering

[Md Sajedul Islam]

Dear All,

I was trying to analyze my data (2408 haploid fungal isolate genotyped
using 17 SSR markers) using 'adegenet' program .

However, I am little bit uncertain how to determine the number of clusters
based on the rate of changes of BIC that I observed from my result. I
am attaching herewith my output files. I chose 3, 4, 5 9 and 10 clusters.
Every time they grouped into three clusters. Should I consider 3 cluster
then?

I will appreciate your suggestions with explanations.

Just another question, is there anyway to see or extract a table from
'adegenet' about which individual belongs to which cluster?

Thanks
*Sajed Islam*

<Sajedul.Islam at ars.usda.gov>
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