[adegenet-forum] SNP alleles

[Caitlin Collins]

For this purpose, it would also be adequate to just change sep from "/" to
" / ", but I suppose there may be other reasons to want to remove the white
spaces.

Cheers,
Caitlin.


On Tue, Jun 17, 2014 at 3:08 PM, Jombart, Thibaut <t.jombart at imperial.ac.uk>
wrote:

>
> Ahah, well spotted! I totally missed it.
>
> Yep, open your file, remove all white spaces, and it should fly.
>
> Cheers
> Thibaut
> ________________________________________
> From: adegenet-forum-bounces at lists.r-forge.r-project.org [
> adegenet-forum-bounces at lists.r-forge.r-project.org] on behalf of Miguel
> Navascués [m.navascues at gmail.com]
> Sent: 17 June 2014 15:01
> To: adegenet-forum at lists.r-forge.r-project.org
> Subject: Re: [adegenet-forum] SNP alleles
>
> In one of your messages (below) there seem to be spaces in addition to
> "/" separating the alleles. May be worth to check if that can cause the
> problem.
>
> Best
>
> Miguel
>
> On 17/06/14 14:47, Andrea Garavito wrote:
> >  >test<-myData[1:10,1:10]
> >  >test
> >      loc_29      loc_7       loc_43  etc...
> > 1  "G / A"      "C / T"     "T / T"
> > 2  "G / G"      "C / T"     "T/ T"
> > etc...
>
>
> --
> Miguel NAVASCUÉS, PhD
>
> Chargé de Recherche (CR2) INRA
>
> UMR CBGP Centre de Biologie pour la Gestion des Populations
> Institut National de la Recherche Agronomique
> Campus International de Baillarguet, CS 30016
> 34988 Montferrier-sur-Lez (France)
>
> phone:  +33(0)4.99.62.33.70
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> e-mail: miguel.navascues AT supagro.inra.fr
> e-mail: m.navascues AT gmail.com
> Skype:  m.navascues
> web:    http://www1.montpellier.inra.fr/cbgp/
> web:    http://sites.google.com/site/navascuesresearch/
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