[adegenet-forum] Fwd: read.plink: Multiple cores is not supported on Windows
Caitlin Collins
caitiecollins17 at gmail.com
Wed Nov 6 19:30:53 CET 2013
---------- Forwarded message ----------
From: Danica Fabrigar <danica_714 at hotmail.com>
Date: Wed, Nov 6, 2013 at 6:19 PM
Subject: RE: [adegenet-forum] read.plink: Multiple cores is not supported
on Windows
To: Caitlin Collins <caitiecollins17 at gmail.com>
Hi Caitlin,
That did the trick.
Thanks you,
Danica
------------------------------
Date: Wed, 6 Nov 2013 17:57:23 +0000
Subject: Re: [adegenet-forum] read.plink: Multiple cores is not supported
on Windows
From: caitiecollins17 at gmail.com
To: danica_714 at hotmail.com
Hi Danica,
While I cannot be certain without knowing precisely what you did to
initiate the upload, I will say that this error message is usually resolved
by adding the argument *parallel=FALSE* to the argument list of the
function you called.
(Note: in older versions of adegenet this used to be multicore=FALSE).
Hope that helps.
Best,
Caitlin.
On Wed, Nov 6, 2013 at 4:22 PM, Danica Fabrigar <danica_714 at hotmail.com>wrote:
Hi,
I am trying to upload my SNP dataset in the PLINK format, however I get the
following error message:
Reading PLINK raw format into a genlight object...
Loading required package: parallel
Reading loci information...
Reading and converting genotypes...
.Error in mclapply(txt, function(e) new("SNPbin", snp = e, ploidy = 2), :
'mc.cores' > 1 is not supported on Windows
Is there a solution to this problem?
Thanks,
Danica
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