[Seqinr-forum] pbil.univ-lyon1.fr:5558 cannot be opened

[Simon Penel]

Hello,

the seqinr server is currently down for maintenance, it will be 
restarted later today.
We are sorry for the inconvenience it is causing you.

all the best

Simon




Le 12/12/2017 à 09:56, Eme, David a écrit :
>
> Dear seqinr user,
>
>
> I used to extract sequences using seqinr functions regularly but today 
> I received the following message when choosing the bank:
>
> choosebank("Genbank", verbose="TRUE")
>
> Error in socketConnection(host = host, port = port, server = server, 
> blocking = blocking,  :
>   cannot open the connection
> In addition: Warning message:
> In socketConnection(host = host, port = port, server = server, 
> blocking = blocking,  :
>   pbil.univ-lyon1.fr:5558 cannot be opened
> Error in choosebank("genbank") :
>   I wasn't able to open the socket connection:
>    o Check that your are connected to the internet.
>    o Check that port 5558 is not closed by a firewall.
>    o Try to increase timeout value (current is 5 seconds).
>
> Here my sessionInfo()
> R version 3.2.0 (2015-04-16)
> Platform: i386-w64-mingw32/i386 (32-bit)
> Running under: Windows 7 (build 7601) Service Pack 1
>
> locale:
> [1] LC_COLLATE=French_France.1252 LC_CTYPE=French_France.1252 
> LC_MONETARY=French_France.1252
> [4] LC_NUMERIC=C  LC_TIME=French_France.1252
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets methods   base
>
> other attached packages:
> [1] seqinr_3.3-6
>
> loaded via a namespace (and not attached):
> [1] tools_3.2.0 ade4_1.7-2
>
>
> So I think the problem come from the server, in addition I also tried 
> to access seqinr R web page 
> (http://pbil.univ-lyon1.fr/software/SeqinR) but I got the following 
> message:
>
>
>   Ce site est inaccessible
>
> *pbil.univ-lyon1.fr* n'autorise pas la connexion.
>
>   * Accédez à http://www.univ-lyon1.fr/
>   * Effectuez une recherche Google sur pbil univ lyon1 fr software
>     SeqinR
>     <https://www.google.co.nz/search?q=pbil%20univ%20lyon1%20fr%20software%20SeqinR>.
>
> ERR_CONNECTION_REFUSED
>
>
> So it seems that the problem comes from the server that refuse the 
> connection, but why?
>
>
> For information, I'm based in New Zealand.
>
>
> Thanks very much in advance!
>
>
> David
>
>
>
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-- 
Simon Penel     ^(;,;)^
Laboratoire de Biometrie et Biologie Evolutive
Bat 711 - CNRS UMR 5558
43 bd du 11 novembre 1918 69622 Villeurbanne Cedex
Tel:   04 72 43 29 04      Fax:  04 72 43 13 88
http://lbbe.univ-lyon1.fr/-Penel-Simon-.html?lang=fr