[Seqinr-forum] loading AA-Sequences from Excel

[Leonor Palmeira]

Hello Immanuel,

the easiest way would be to convert your data in .fasta format and use 
the seqinR tools to read your file in. There are of course other 
possibilities, but if you're a beginner to R, I would suggest to start 
things this way.

Best,
Leonor.

Immanuel a écrit :
> Hello,
> 
> I have AA-sequences in an excel file. Each row contains
> one sequence, the first column the sequence id and the second
> the AA- sequence as one large String.
> 
> I'm quite new to R and wondering what would be best way
> to load the data in SeqinR. Do I need to convert the data into
> the fasta format? Is it possible to load data from R data frame?
> 
> Any hints are very much appreciated.
> 
> best regards,
> Immanuel
> 
> _______________________________________________
> Seqinr-forum mailing list
> Seqinr-forum at lists.r-forge.r-project.org
> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/seqinr-forum
> 

-- 
/************************************************/
/* Leonor Palmeira, PhD                         */
/*                                              */
/* +32 4 3664269                                */
/* mlpalmeira AT ulg DOT ac DOT be              */
/*                                              */
/* http://sites.google.com/site/leonorpalmeira  */
/*                                              */
/* Laboratory of Immunology-Vaccinology         */
/* 20, Boulevard de Colonster, Bat. B43b        */
/* Faculty of Veterinary Medicine               */
/* University of Liege                          */
/* B-4000 Liege (Sart-Tilman)                   */
/* Belgium                                      */
/************************************************/