[Rsiena-help] Possible error with multi-core estimation in rev. 119
Ruth M. Ripley
ruth at stats.ox.ac.uk
Thu Sep 23 15:40:18 CEST 2010
Dear Guido,
I have corrected RSiena on r-forge.
Please would you check the new version of RSienaTest for me (rev.120). If
it fails please would you tell me what sort of model you are fitting.
one-mode/bipartite/behavior variables/covariates/effects...
Regards,
Ruth
On Tue, 31 Aug 2010, Guido Conaldi wrote:
> Dear Ruth,
>
> RSienaTest keeps crashing when I try estimating my models:
>
> *** glibc detected *** /usr/lib64/R/bin/exec/R: free(): invalid next
> size (fast): 0x000000000506b9f0 ***
>
> I can save the backtrace for later inspection if that may help.
>
> However, I patched and build the tar ball as you suggested and
> multi-core is working fine again.
>
> Thank you very much and enjoy your holiday,
> Regards,
> Guido
>
> On Tue, 2010-08-31 at 11:58 +0100, Ruth M. Ripley wrote:
>> Dear Guido,
>>
>> As Tom says, I am on holiday. But I know what the bug is and it should not
>> exist in RSienaTest. Please try using RSienaTest from R-forge. It should
>> give the same answers for one core and not fail for more than one.
>>
>> Alternatively, if you are able to unpack the tar ball and build the
>> package yourself, try making a one line change to R/simstatsc.r. After
>> line 1762, which is
>>
>> nGroup <- ff$nGroup
>>
>> add
>>
>> types <- ff$types
>>
>> and rebuild.
>>
>> I will sort RSiena out when I get back to work.
>>
>> Regards,
>>
>> Ruth
>>
>> On Tue, 31 Aug 2010, Guido Conaldi wrote:
>>
>>> Dear Ruth,
>>>
>>> I updated to rev.119 and since then I experience an error if I try to
>>> use more than one core (3 in this case, as you can see):
>>>
>>> Error in checkForRemoteErrors(lapply(cl, recvResult)) :
>>> 3 nodes produced errors; first error: object 'types' not found
>>>
>>> With one core, estimation seems to be running fine.
>>>
>>> I hope you can help,
>>> Regards
>>> Guido
>>>
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>>> Rsiena-help mailing list
>>> Rsiena-help at lists.r-forge.r-project.org
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>>>
>
>
>
>
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