[Rcpp-devel] Error compiling Rcpp 0.10.4

[Simon Zehnder]

Romain, Jonathan,

an update on the error I reported: This was due to some gettext failure in the configuration of the R build on the Mac. I had to use the configure options --with-included-gettext and everything worked after installation. For a config.log if interested see here: https://gist.github.com/anonymous/6541684.

Thanks again for your quick help!


Best

Simon

On Sep 12, 2013, at 5:54 PM, Simon Zehnder <szehnder at uni-bonn.de> wrote:

> Romain, Jonathan,
> 
> many thanks for the quick response. This is actually very good to know, that the -lintl is not in there usually. What I will do is to recompile my R from sources - but this time without the option --with-valgrind-instrumentation. Hopefully this is the source of error.
> 
> Coming back to this later with hopefully some positive results.
> 
> Best
> 
> Simon
> 
> On Sep 12, 2013, at 5:47 PM, Jonathan Olmsted <jolmsted at princeton.edu> wrote:
> 
>> Any idea where that is coming from? It isn't coming from the Rcpp Makevars or from a default Macports installation (as best as I can tell). I just did an clean install of R from a clean Macports and then installed Rcpp from within R.
>> 
>> g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64 -o Rcpp.so Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o -F/opt/local/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
>> g++ -o libRcpp.dylib Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress   -F/opt/local/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
>> ar qc libRcpp.a Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o
>> 
>> 
>> 
>> 
>> -------------------------------------------------------------------------
>> J.P. Olmsted
>> 
>> 029 Corwin (Office)
>> 130 Corwin Hall (Mail)
>> 
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>> Princeton University
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>> 
>> 
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>> http://about.me/olmjo
>> -------------------------------------------------------------------------
>> 
>> 
>> On Thu, Sep 12, 2013 at 10:28 AM, Simon Zehnder <szehnder at uni-bonn.de> wrote:
>> Dear Rcpp-Users and Rcpp-Devels,
>> 
>> I had to reinstall my system lately and compiled R-3.0.1. I installed several packages and all installations went well. Then I tried to install Rcpp 0.10.4. and I got:
>> 
>> R CMD INSTALL Rcpp
>> * installing to library ‘/Users/simonzehnder/Library/R/3.0/library’
>> * installing *source* package ‘Rcpp’ ...
>> ** package ‘Rcpp’ successfully unpacked and MD5 sums checked
>> ** libs
>> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include    -fPIC  -g -O2  -c Date.cpp -o Date.o
>> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include    -fPIC  -g -O2  -c Module.cpp -o Module.o
>> gcc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include    -fPIC  -g -O2  -c Rcpp_init.c -o Rcpp_init.o
>> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include    -fPIC  -g -O2  -c Timer.cpp -o Timer.o
>> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include    -fPIC  -g -O2  -c api.cpp -o api.o
>> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include    -fPIC  -g -O2  -c attributes.cpp -o attributes.o
>> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include    -fPIC  -g -O2  -c barrier.cpp -o barrier.o
>> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I../inst/include/ -I/opt/local/include    -fPIC  -g -O2  -c exceptions.cpp -o exceptions.o
>> g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/opt/local/lib -o Rcpp.so Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o -F/Library/Frameworks/R.framework/.. -framework R -lintl -Wl,-framework -Wl,CoreFoundation
>> g++ -o libRcpp.dylib Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress   -F/Library/Frameworks/R.framework/.. -framework R -lintl -Wl,-framework -Wl,CoreFoundation
>> ld: library not found for -lintl
>> collect2: error: ld returned 1 exit status
>> make: *** [libRcpp] Error 1
>> ERROR: compilation failed for package ‘Rcpp’
>> * removing ‘/Users/simonzehnder/Library/R/3.0/library/Rcpp’
>> 
>> What is the intl library and what could be the error.
>> 
>> My System: Mac OS X Mountain Lion 10.8.4, Macports gcc48 Compiler
>> 
>> 
>> Best
>> 
>> Simon
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