[Rcpp-devel] Rcpp compile question
Henry Bee
henry.bee at gmail.com
Tue Mar 22 22:15:22 CET 2011
Hi Douglas,
I assume I do not need to do anything with R after installing RTools? I
reinstalled RTools and restarted R and got the same errors.
Henry
On Tue, Mar 22, 2011 at 12:24 PM, Douglas Bates <bates at stat.wisc.edu> wrote:
> On Tue, Mar 22, 2011 at 2:16 PM, Henry Bee <henry.bee at gmail.com> wrote:
> > Hi Christian,
> > Thanks for the source file. Below are the full results as you requested.
> > It's giving the same error as before. Is 64-bit R supported?
>
> 64-bit R is supported. Has it already been established that you have
> the Rtools (compilers, linkers, etc.) from
> www.murdoch-sutherland.com/Rtools/ installed?
>
> >> source('tmp.R', verbose = TRUE)
> > 'envir' chosen:<environment: R_GlobalEnv>
> > encoding = "native.enc" chosen
> > --> parsed 3 expressions; now eval(.)ing them:
> >>>>> eval(expression_nr. 1 )
> > =================
> >> require(inline)
> > curr.fun: symbol require
> > .. after ‘expression(require(inline))’
> >>>>> eval(expression_nr. 2 )
> > =================
> >> src <- '
> > + Rcpp::NumericVector xa(a);
> > + Rcpp::NumericVector xb(b);
> > + int n_xa = xa.size(), n_xb = xb.size();
> > +
> > + Rcpp::NumericVector xab(n_xa + n_x .... [TRUNCATED]
> > curr.fun: symbol <-
> > .. after ‘expression(src <- '’‘Rcpp::NumericVector
> > xa(a);’‘Rcpp::NumericVector xb(b);’‘int n_xa = xa.size(), n_xb =
> > xb.size();’‘’‘Rcpp::NumericVector xab(n_xa + n_xb - 1);’‘for (int i = 0;
> i <
> > n_xa; i++)’‘for (int j = 0; j < n_xb; j++)’‘xab[i + j] += xa[i] *
> > xb[j];’‘return xab;’‘')’
> >>>>> eval(expression_nr. 3 )
> > =================
> >> fun <- cxxfunction( signature(a="numeric", b="numeric"), src,
> >> plugin="Rcpp", verbose=TRUE)
> > >> setting environment variables:
> > PKG_LIBS =
> > D:/Users/Henry/Documents/R/win-library/2.12/Rcpp/lib/x64/libRcpp.a
> > >> LinkingTo : Rcpp
> > CLINK_CPPFLAGS =
> > -I"D:/Users/Henry/Documents/R/win-library/2.12/Rcpp/include"
> > >> Program source :
> > 1 :
> > 2 : // includes from the plugin
> > 3 :
> > 4 : #include <Rcpp.h>
> > 5 :
> > 6 :
> > 7 : #ifndef BEGIN_RCPP
> > 8 : #define BEGIN_RCPP
> > 9 : #endif
> > 10 :
> > 11 : #ifndef END_RCPP
> > 12 : #define END_RCPP
> > 13 : #endif
> > 14 :
> > 15 : using namespace Rcpp;
> > 16 :
> > 17 :
> > 18 : // user includes
> > 19 :
> > 20 :
> > 21 : // declarations
> > 22 : extern "C" {
> > 23 : SEXP file5a2532f3( SEXP a, SEXP b) ;
> > 24 : }
> > 25 :
> > 26 : // definition
> > 27 :
> > 28 : SEXP file5a2532f3( SEXP a, SEXP b ){
> > 29 : BEGIN_RCPP
> > 30 :
> > 31 : Rcpp::NumericVector xa(a);
> > 32 : Rcpp::NumericVector xb(b);
> > 33 : int n_xa = xa.size(), n_xb = xb.size();
> > 34 :
> > 35 : Rcpp::NumericVector xab(n_xa + n_xb - 1);
> > 36 : for (int i = 0; i < n_xa; i++)
> > 37 : for (int j = 0; j < n_xb; j++)
> > 38 : xab[i + j] += xa[i] * xb[j];
> > 39 : return xab;
> > 40 :
> > 41 : END_RCPP
> > 42 : }
> > 43 :
> > 44 :
> > Compilation argument:
> > C:\PROGRA~1\R\R-212~1.2/bin/x64/R CMD SHLIB file5a2532f3.cpp 2>
> > file5a2532f3.cpp.err.txt
> > ERROR(s) during compilation: source code errors or compiler configuration
> > errors!
> > Program source:
> > 1:
> > 2: // includes from the plugin
> > 3:
> > 4: #include <Rcpp.h>
> > 5:
> > 6:
> > 7: #ifndef BEGIN_RCPP
> > 8: #define BEGIN_RCPP
> > 9: #endif
> > 10:
> > 11: #ifndef END_RCPP
> > 12: #define END_RCPP
> > 13: #endif
> > 14:
> > 15: using namespace Rcpp;
> > 16:
> > 17:
> > 18: // user includes
> > 19:
> > 20:
> > 21: // declarations
> > 22: extern "C" {
> > 23: SEXP file5a2532f3( SEXP a, SEXP b) ;
> > 24: }
> > 25:
> > 26: // definition
> > 27:
> > 28: SEXP file5a2532f3( SEXP a, SEXP b ){
> > 29: BEGIN_RCPP
> > 30:
> > 31: Rcpp::NumericVector xa(a);
> > 32: Rcpp::NumericVector xb(b);
> > 33: int n_xa = xa.size(), n_xb = xb.size();
> > 34:
> > 35: Rcpp::NumericVector xab(n_xa + n_xb - 1);
> > 36: for (int i = 0; i < n_xa; i++)
> > 37: for (int j = 0; j < n_xb; j++)
> > 38: xab[i + j] += xa[i] * xb[j];
> > 39: return xab;
> > 40:
> > 41: END_RCPP
> > 42: }
> > 43:
> > 44:
> > Error in compileCode(f, code, language = language, verbose = verbose) :
> > Compilation ERROR, function(s)/method(s) not created!
> > In addition: Warning message:
> > running command 'C:\PROGRA~1\R\R-212~1.2/bin/x64/R CMD SHLIB
> > file5a2532f3.cpp 2> file5a2532f3.cpp.err.txt' had status 1
> >>
> >
> >
> > 2011/3/21 Christian Gunning <icos.atropa at gmail.com>
> >>
> >> "Here's the command:"
> >>
> >> Works for me. Try sourcing the attached file (which includes your
> >> command, +verbose=T), and post back the *full* results, including the
> >> source('tmp.R.txt') command and the next prompt line.
> >>
> >> -christian
> >>
> >> --
> >> A man, a plan, a cat, a ham, a yak, a yam, a hat, a canal – Panama!
> >
> >
> > _______________________________________________
> > Rcpp-devel mailing list
> > Rcpp-devel at lists.r-forge.r-project.org
> > https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel
> >
> >
>
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