[Rcpp-devel] Rcpp compile question
Douglas Bates
bates at stat.wisc.edu
Tue Mar 22 20:24:01 CET 2011
On Tue, Mar 22, 2011 at 2:16 PM, Henry Bee <henry.bee at gmail.com> wrote:
> Hi Christian,
> Thanks for the source file. Below are the full results as you requested.
> It's giving the same error as before. Is 64-bit R supported?
64-bit R is supported. Has it already been established that you have
the Rtools (compilers, linkers, etc.) from
www.murdoch-sutherland.com/Rtools/ installed?
>> source('tmp.R', verbose = TRUE)
> 'envir' chosen:<environment: R_GlobalEnv>
> encoding = "native.enc" chosen
> --> parsed 3 expressions; now eval(.)ing them:
>>>>> eval(expression_nr. 1 )
> =================
>> require(inline)
> curr.fun: symbol require
> .. after ‘expression(require(inline))’
>>>>> eval(expression_nr. 2 )
> =================
>> src <- '
> + Rcpp::NumericVector xa(a);
> + Rcpp::NumericVector xb(b);
> + int n_xa = xa.size(), n_xb = xb.size();
> +
> + Rcpp::NumericVector xab(n_xa + n_x .... [TRUNCATED]
> curr.fun: symbol <-
> .. after ‘expression(src <- '’‘Rcpp::NumericVector
> xa(a);’‘Rcpp::NumericVector xb(b);’‘int n_xa = xa.size(), n_xb =
> xb.size();’‘’‘Rcpp::NumericVector xab(n_xa + n_xb - 1);’‘for (int i = 0; i <
> n_xa; i++)’‘for (int j = 0; j < n_xb; j++)’‘xab[i + j] += xa[i] *
> xb[j];’‘return xab;’‘')’
>>>>> eval(expression_nr. 3 )
> =================
>> fun <- cxxfunction( signature(a="numeric", b="numeric"), src,
>> plugin="Rcpp", verbose=TRUE)
> >> setting environment variables:
> PKG_LIBS =
> D:/Users/Henry/Documents/R/win-library/2.12/Rcpp/lib/x64/libRcpp.a
> >> LinkingTo : Rcpp
> CLINK_CPPFLAGS =
> -I"D:/Users/Henry/Documents/R/win-library/2.12/Rcpp/include"
> >> Program source :
> 1 :
> 2 : // includes from the plugin
> 3 :
> 4 : #include <Rcpp.h>
> 5 :
> 6 :
> 7 : #ifndef BEGIN_RCPP
> 8 : #define BEGIN_RCPP
> 9 : #endif
> 10 :
> 11 : #ifndef END_RCPP
> 12 : #define END_RCPP
> 13 : #endif
> 14 :
> 15 : using namespace Rcpp;
> 16 :
> 17 :
> 18 : // user includes
> 19 :
> 20 :
> 21 : // declarations
> 22 : extern "C" {
> 23 : SEXP file5a2532f3( SEXP a, SEXP b) ;
> 24 : }
> 25 :
> 26 : // definition
> 27 :
> 28 : SEXP file5a2532f3( SEXP a, SEXP b ){
> 29 : BEGIN_RCPP
> 30 :
> 31 : Rcpp::NumericVector xa(a);
> 32 : Rcpp::NumericVector xb(b);
> 33 : int n_xa = xa.size(), n_xb = xb.size();
> 34 :
> 35 : Rcpp::NumericVector xab(n_xa + n_xb - 1);
> 36 : for (int i = 0; i < n_xa; i++)
> 37 : for (int j = 0; j < n_xb; j++)
> 38 : xab[i + j] += xa[i] * xb[j];
> 39 : return xab;
> 40 :
> 41 : END_RCPP
> 42 : }
> 43 :
> 44 :
> Compilation argument:
> C:\PROGRA~1\R\R-212~1.2/bin/x64/R CMD SHLIB file5a2532f3.cpp 2>
> file5a2532f3.cpp.err.txt
> ERROR(s) during compilation: source code errors or compiler configuration
> errors!
> Program source:
> 1:
> 2: // includes from the plugin
> 3:
> 4: #include <Rcpp.h>
> 5:
> 6:
> 7: #ifndef BEGIN_RCPP
> 8: #define BEGIN_RCPP
> 9: #endif
> 10:
> 11: #ifndef END_RCPP
> 12: #define END_RCPP
> 13: #endif
> 14:
> 15: using namespace Rcpp;
> 16:
> 17:
> 18: // user includes
> 19:
> 20:
> 21: // declarations
> 22: extern "C" {
> 23: SEXP file5a2532f3( SEXP a, SEXP b) ;
> 24: }
> 25:
> 26: // definition
> 27:
> 28: SEXP file5a2532f3( SEXP a, SEXP b ){
> 29: BEGIN_RCPP
> 30:
> 31: Rcpp::NumericVector xa(a);
> 32: Rcpp::NumericVector xb(b);
> 33: int n_xa = xa.size(), n_xb = xb.size();
> 34:
> 35: Rcpp::NumericVector xab(n_xa + n_xb - 1);
> 36: for (int i = 0; i < n_xa; i++)
> 37: for (int j = 0; j < n_xb; j++)
> 38: xab[i + j] += xa[i] * xb[j];
> 39: return xab;
> 40:
> 41: END_RCPP
> 42: }
> 43:
> 44:
> Error in compileCode(f, code, language = language, verbose = verbose) :
> Compilation ERROR, function(s)/method(s) not created!
> In addition: Warning message:
> running command 'C:\PROGRA~1\R\R-212~1.2/bin/x64/R CMD SHLIB
> file5a2532f3.cpp 2> file5a2532f3.cpp.err.txt' had status 1
>>
>
>
> 2011/3/21 Christian Gunning <icos.atropa at gmail.com>
>>
>> "Here's the command:"
>>
>> Works for me. Try sourcing the attached file (which includes your
>> command, +verbose=T), and post back the *full* results, including the
>> source('tmp.R.txt') command and the next prompt line.
>>
>> -christian
>>
>> --
>> A man, a plan, a cat, a ham, a yak, a yam, a hat, a canal – Panama!
>
>
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