[Rcpp-devel] Rcpp Module Errors
Andrew Redd
amredd at gmail.com
Wed Jun 22 00:51:12 CEST 2011
I apologize if this has been covered. I've looked and see a couple of post
relating to this issue, but I'm not sure if it was ever solved. The example
modules appear to not work, at least for me. On a related note I can't get
my modules to run either, but If I can figure out how to run the examples I
think I can get mine running.
R> sessionInfo()
R version 2.13.0 (2011-04-13)
Platform: x86_64-pc-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] Rcpp_0.9.4
To install the package skeleton:
$ r -lRcpp -e"Rcpp.package.skeleton(\"test\",module=T)"
Attaching package: 'utils'
The following object(s) are masked from 'package:Rcpp':
.DollarNames, prompt
Creating directories ...
Creating DESCRIPTION ...
Creating NAMESPACE ...
Creating Read-and-delete-me ...
Saving functions and data ...
Making help files ...
Done.
Further steps are described in './test/Read-and-delete-me'.
Adding Rcpp settings
>> added RcppModules: yada
>> added Depends: Rcpp
>> added LinkingTo: Rcpp
>> added useDynLib directive to NAMESPACE
>> added Makevars file with Rcpp settings
>> added Makevars.win file with Rcpp settings
>> added example header file using Rcpp classes
>> added example src file using Rcpp classes
>> added example R file calling the C++ example
>> added Rd file for rcpp_hello_world
>> copied the example module
build
$ R CMD build test
<<output omitted>>
and check with an error.
$R CMD check test_1.0.tar.gz
<<output omitted>>
* checking whether the name space can be loaded with stated dependencies ...
WARNING
Error: .onLoad failed in loadNamespace() for 'test', details:
call: value[[3L]](cond)
error: failed to load module yada from package test
Execution halted
<<output omitted>>
According to Dirk's June 15th post on the issue I include require("methods",
character=TRUE, quietly=TRUE) in the .onLoad function, now checks ok but
when trying things out I get a segmentation fault.
$ R -q --vanilla
R> library(test)
Loading required package: Rcpp
R> Module('yada','test')$bla()
*** caught segfault ***
address 0x90, cause 'memory not mapped'
Traceback:
1: .Call(symbol)
2: Module(module, mustStart = TRUE)
3: .getModulePointer(x)
4: Module("yada", "test")$bla
Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
Selection:
So questions are:
1) is anyone else getting this error?
2) does anyone know how to fix it?
Thanks,
Andrew
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/rcpp-devel/attachments/20110621/c46dbcb3/attachment.htm>
More information about the Rcpp-devel
mailing list