[Rcpp-devel] Problem compling rinside_sample0 on OSX

[Dan Kulp]

Haha, looks like the thread got sidetracked....  I have a 3-button mouse all
the time.

How should I "switching to 0.7.11 from its tarball may do the trick" ... ?

Libraries from CRAN installed into .../Library/R/2.10/library/Rcpp and
.../LibraryR/2.10/library/RIniside

I tried to download the OSX binary 0.7.11 tar ball and untar into
/Library/R/2.10/library/  , but got the same error.

Thanks,
Dan




On Tue, Apr 6, 2010 at 6:45 AM, Romain Francois <romain at r-enthusiasts.com>wrote:

> Le 06/04/10 14:34, Douglas Bates a écrit :
> >
> > On Tue, Apr 6, 2010 at 5:19 AM, Romain Francois
> > <romain at r-enthusiasts.com>  wrote:
> >> Le 06/04/10 12:14, Dirk Eddelbuettel a écrit :
> >>> Hi Dan,
> >>>
> >>> Thanks for switching to the list.
> >>>
> >>> On 5 April 2010 at 22:12, Dan Kulp wrote:
> >>> | Hey,
> >>> |   I just installed Rcpp RInside successful using CRAN, but when I try
> to
> >>> | "make rinside_sample0" I get the following linking errors:
> >>> |
> >>> | ld warning: option -s is obsolete and being ignored
> >>> | Undefined symbols:
> >>> |   "SEXPREC* Rcpp::grow<Rcpp::Named>(Rcpp::Named const&, SEXPREC*)",
> >>> | referenced from:
> >>> |       SEXPREC* Rcpp::pairlist<Rcpp::Function, Rcpp::Named,
> >>> | Rcpp::Named>(Rcpp::Function const&, Rcpp::Named const&, Rcpp::Named
> >>> | const&)in libRInside.a(RInside.o)
> >>> |       SEXPREC* Rcpp::pairlist<Rcpp::Function, Rcpp::Named,
> >>> | Rcpp::Named>(Rcpp::Function const&, Rcpp::Named const&, Rcpp::Named
> >>> | const&)in libRInside.a(RInside.o)
> >>> | ld: symbol(s) not found
> >>> | collect2: ld returned 1 exit status
> >>> | make: *** [rinside_sample0] Error 1
> >>>
> >>> I think I just had that yesterday at work -- you do have to be careful
> to use
> >>> _matching_ RInside and Rcpp releases.  Which I why going with CRAN is a
> good
> >>> option.
> >>>
> >>> Using the _released_ versions 0.7.11 for Rcpp and 0.2.2 for RInside
> should
> >>> 'just work'.   As Romain said, please send along the version numbers
> you used.
> >>
> >> Totally. It seems though that when you install from cran you get Rcpp
> >> 0.7.10 even though cran advertizes 0.7.11, but I did not try all
> mirrors.
> >
> > It is not uncommon for the OS X binaries on CRAN to lag the other
> > versions of a package.  It seems that building the OS X binaries is
> > more involved than even the Windows binaries.
> >
> > I solve the problem of lagging OS X binaries by installing Linux on
> > any Macs I use and ignoring the OS X system.  Now if only I could get
> > around the stupid 1-button mouse and bizarre key mappings.  :-)
>
> There is a setting in System preferences > Mouse that lets you emulate a
> two button mouse (at least with the magic mouse that was shipped with mine)
>
> For the keyboard, I am still hostage. I often google for the keystrokes.
>
> > (The true sign of a died-in-the-wool Macophile is when they try to
> > convince why a 1-button mouse is really a good idea.)
>
> not there yet.
>
> >>> | Is this an OSX specific thing, or is the example code not sync'd with
> the
> >>> | library from CRAN?.... or something else?
> >>>
> >>> We do try to make pretty sure that this works for _released_ versions.
> >>   >
> >>> Rcpp tends to change a lot so there sometimes is something changing at
> its
> >>> side that may not yet be reflected at the RInside side. We try to
> minimise
> >>> that but it happens. Sticking with the releases should help as a
> remedy.
> >>>
> >>> Thanks, Dirk
>
>
> --
> Romain Francois
> Professional R Enthusiast
> +33(0) 6 28 91 30 30
> http://romainfrancois.blog.free.fr
> |- http://bit.ly/9aKDM9 : embed images in Rd documents
> |- http://tr.im/OIXN : raster images and RImageJ
> |- http://tr.im/OcQe : Rcpp 0.7.7
>
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-- 
Dan Kulp, PhD
Postdoctoral Fellow
Biosciences Division, B-9
Los Alamos National Laboratory
Los Alamos,NM 87545
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