[Rcolony-commits] r50 - in pkg: R man

[noreply at r-forge.r-project.org]

Author: jonesor
Date: 2009-05-11 11:16:17 +0200 (Mon, 11 May 2009)
New Revision: 50

Modified:
   pkg/R/plotsibs.R
   pkg/man/build.colony.input.Rd
Log:
Fixed (I think) tables. I had \cr on the last line: a mistake

Modified: pkg/R/plotsibs.R
===================================================================
--- pkg/R/plotsibs.R	2009-05-10 21:47:01 UTC (rev 49)
+++ pkg/R/plotsibs.R	2009-05-11 09:16:17 UTC (rev 50)
@@ -2,6 +2,7 @@
 function(colony.object,maintitle="sibships",prob=0.8,pairwise=FALSE){
 	 
 	 #Get full and half sibship data.
+
 if(pairwise==FALSE){	
 sibs<-colony.object$sibs}else{
 sibs<-colony.object$pairwise.sibs

Modified: pkg/man/build.colony.input.Rd
===================================================================
--- pkg/man/build.colony.input.Rd	2009-05-10 21:47:01 UTC (rev 49)
+++ pkg/man/build.colony.input.Rd	2009-05-11 09:16:17 UTC (rev 50)
@@ -46,7 +46,7 @@
 
  An example file of the allele frequency data is shown below.
 
-\tabular{rrrrrrrrrrrrrrr}{
+\tabular{rrrrrrrrrrrrrrrr}{
  1 \tab 2 \tab 3 \tab 4 \tab 5 \tab 6 \tab 7 \tab 8 \tab 9 \tab 10 \tab 11 \tab 12 \tab  \tab  \tab  \tab \cr 
 0.1000 \tab 0.0600 \tab 0.0350 \tab 0.0700 \tab 0.0700 \tab 0.1400 \tab 0.1500 \tab 0.0550 \tab 0.0550 \tab 0.0250 \tab 0.1350 \tab 0.1050 \tab  \tab  \tab  \tab \cr 
 1 \tab 2 \tab 3 \tab 4 \tab 5 \tab 6 \tab 7 \tab 8 \tab 9 \tab 10 \tab 11 \tab 12 \tab 13 \tab  \tab  \tab \cr 
@@ -66,7 +66,7 @@
 1 \tab 2 \tab 3 \tab 4 \tab 5 \tab 6 \tab 7 \tab 8 \tab 9 \tab 10 \tab 11 \tab 12 \tab 13 \tab 14 \tab 15\cr 
 0.0800 \tab 0.0650 \tab 0.0600 \tab 0.0300 \tab 0.1250 \tab 0.0800 \tab 0.0500 \tab 0.0600 \tab 0.0900 \tab 0.0650 \tab 0.1250 \tab 0.0700 \tab 0.0500 \tab 0.0200 \tab 0.0300\cr 
 1 \tab 2 \tab 3 \tab 4 \tab 5 \tab 6 \tab 7 \tab 8 \tab 9 \tab 10 \tab 11 \tab 12 \tab 13 \tab 14 \tab 15 \tab 16\cr 
-0.0900 \tab 0.1500 \tab 0.0200 \tab 0.0500 \tab 0.0550 \tab 0.0750 \tab 0.0850 \tab 0.0650 \tab 0.0600 \tab 0.1000 \tab 0.0400 \tab 0.0550 \tab 0.0300 \tab 0.0400 \tab 0.0200 \tab 0.0650\cr 
+0.0900 \tab 0.1500 \tab 0.0200 \tab 0.0500 \tab 0.0550 \tab 0.0750 \tab 0.0850 \tab 0.0650 \tab 0.0600 \tab 0.1000 \tab 0.0400 \tab 0.0550 \tab 0.0300 \tab 0.0400 \tab 0.0200 \tab 0.0650 
  
 }
 
@@ -102,7 +102,7 @@
  mk1 \tab     mk2 \tab     mk3  \tab   mk4 \tab     mk5 \cr
        0 \tab       0 \tab      0 \tab      0 \tab       0 \cr
   0.0000 \tab  0.0000 \tab 0.0000 \tab 0.0000 \tab  0.0000 \cr
-  0.0001 \tab  0.0001 \tab  0.0001 \tab 0.0001 \tab  0.0001 \cr
+  0.0001 \tab  0.0001 \tab  0.0001 \tab 0.0001 \tab  0.0001 
 }
 
 \emph{Offspring genotypes.}
@@ -116,7 +116,7 @@
   O2 \tab 1 \tab 1 \tab 13 \tab 7 \tab 4 \tab 2 \tab 3 \tab 2 \tab  3 \tab 4 \cr
   O3 \tab 1 \tab 1 \tab 6 \tab 5 \tab 4 \tab 3 \tab 2 \tab 2 \tab 1 \tab 5  \cr
   O4 \tab 1 \tab 1 \tab 6 \tab  10 \tab 4 \tab 3 \tab 3 \tab 3 \tab 1 \tab 5 \cr 
-  O5 \tab 1 \tab 1 \tab 6 \tab 5 \tab 4 \tab 2 \tab 3 \tab 5 \tab 1 \tab 5 \cr }
+  O5 \tab 1 \tab 1 \tab 6 \tab 5 \tab 4 \tab 2 \tab 3 \tab 5 \tab 1 \tab 5  }