[Phylobase-devl] Fwd: Re: CRAN packages more and phylobase

[Ben Bolker]

-------- Original Message --------
Subject: Re: CRAN packages more and phylobase
Date: Fri, 11 Jan 2013 16:44:00 -0500
From: Ben Bolker <bbolker at gmail.com>
To: Prof Brian Ripley <ripley at stats.ox.ac.uk>
CC: cran at R-project.org <cran at R-project.org>

  Just to let you know: I've started working on this but am having
trouble building a sufficiently recent version of r-devel on my system
(see my recent posts to the r-devel mailing list), so a solution will
be delayed until I can sort that out.

  cheers
    Ben Bolker


On 13-01-06 02:19 AM, Prof Brian Ripley wrote:
> Following JMC's changes to @<- in R-devel, these are failing their 
> tests.  Since you use obfuscation suites in your tests, we'll
> leave you to find your own errors:
> 
> * checking tests ... ERROR Running the tests in ‘tests/doRUnit.R’ 
> failed. Last 13 lines of output:
> 
> 
> 1 Test Suite : move unit testing - 5 test functions, 0 errors, 1 
> failure FAILURE in test.citations: Error in 
> checkException(citations(a) <- factor("a")) :
> 
> and
> 
> * checking tests ... ERROR Running the tests in ‘tests/doRUnit.R’ 
> failed. Last 13 lines of output: Number of failures: 1
> 
> 
> 1 Test Suite : phylobase unit testing - 100 test functions, 0 
> errors, 1 failure FAILURE in test.phylo4.matrix: Error in 
> checkException(phylo4(edge, annote = "invalid annotation")) :
> Error not generated as expected
> 
> but we can give you a hint: JMC checked the validity test for 
> @<-from slot names being in the class to slot names already 
> exxisting on the object.
>