[Phylobase-devl] Build fails for MacOS X

[François Michonneau]

Thanks for checking on this Ben.

  I think the Solaris issue is caused by Rcpp. Maybe if we specify to
use the latest version of Rcpp in the DESCRIPTION file it'll work.
Otherwise, we can send an email to Dirk.

  I can commit an updated output for the RUnit tests if needed.

  Cheers,
  -- François

On Mon, 2011-03-21 at 10:26 -0400, Ben Bolker wrote:
> -----BEGIN PGP SIGNED MESSAGE-----
> Hash: SHA1
> 
> On 03/21/2011 10:00 AM, François Michonneau wrote:
> > 
> > Hi all,
> > 
> >   I recently realized that I didn't release phylobase 0.6.3 on CRAN.
> > While checking on R-forge the status on the builds before doing so, it
> > looks that it doesn't build on MacOS X. Is it a glitch from R-forge or
> > is there really a problem?
> > 
> >   Thanks,
> >   -- François
> 
>   It passes R CMD check just fine on R 2.12.1 under MacOS X here.  The
> error message looks pretty obscure (compiler bus error [!]). It sounds
> worth asking the r-forge maintainers?
> 
>   Other building news:
> 
>   checking CRAN build tests:
> 
>   failing on Solaris (do we care???)
> <http://www.r-project.org/nosvn/R.check/r-prerel-solaris-sparc/phylobase-00check.html>
> <http://www.r-project.org/nosvn/R.check/r-prerel-solaris-x86/phylobase-00check.html>
> 
> Failing on windows, but this looks like a glitch in the build system (it
> can't load the ape package because it can't find the nlme package ??)
> <http://www.r-project.org/nosvn/R.check/r-release-windows-ix86+x86_64/phylobase-00check.html>
> 
>   We're getting a few "notes" on the other builds on CRAN, e.g.
> 
> <http://www.r-project.org/nosvn/R.check/r-devel-linux-ix86/phylobase-00check.html>
> 
> checking installed package size ... NOTE
> installed size is 11.6Mb
> sub-directories of 1Mb or more:
> libs 10.4Mb
> 
>   [don't know if we can do anything about this, it's probably just from
> building all of NCL?]
> 
>   There is another NOTE regarding partial matching which I hope to have
> fixed on r-forge.
> 
>   The RUnit test output is *very* noisy at the moment.
> 
>   cheers
>     Ben
> 
> 
> -----BEGIN PGP SIGNATURE-----
> Version: GnuPG v1.4.10 (GNU/Linux)
> Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
> 
> iEYEARECAAYFAk2HYCQACgkQc5UpGjwzenMMOwCgkGwrnHMnNN3XpA5JqRgMkY7k
> 1G4AmwaDXsQH1OBgtzOMmdJ6ZLFZZLcL
> =YaN2
> -----END PGP SIGNATURE-----
-------------- next part --------------
A non-text attachment was scrubbed...
Name: not available
Type: application/pgp-signature
Size: 198 bytes
Desc: This is a digitally signed message part
URL: <http://lists.r-forge.r-project.org/pipermail/phylobase-devl/attachments/20110321/2b5dddd6/attachment.pgp>