[Phylobase-devl] Build fails for MacOS X

Ben Bolker bbolker at gmail.com
Mon Mar 21 15:26:44 CET 2011


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On 03/21/2011 10:00 AM, François Michonneau wrote:
> 
> Hi all,
> 
>   I recently realized that I didn't release phylobase 0.6.3 on CRAN.
> While checking on R-forge the status on the builds before doing so, it
> looks that it doesn't build on MacOS X. Is it a glitch from R-forge or
> is there really a problem?
> 
>   Thanks,
>   -- François

  It passes R CMD check just fine on R 2.12.1 under MacOS X here.  The
error message looks pretty obscure (compiler bus error [!]). It sounds
worth asking the r-forge maintainers?

  Other building news:

  checking CRAN build tests:

  failing on Solaris (do we care???)
<http://www.r-project.org/nosvn/R.check/r-prerel-solaris-sparc/phylobase-00check.html>
<http://www.r-project.org/nosvn/R.check/r-prerel-solaris-x86/phylobase-00check.html>

Failing on windows, but this looks like a glitch in the build system (it
can't load the ape package because it can't find the nlme package ??)
<http://www.r-project.org/nosvn/R.check/r-release-windows-ix86+x86_64/phylobase-00check.html>

  We're getting a few "notes" on the other builds on CRAN, e.g.

<http://www.r-project.org/nosvn/R.check/r-devel-linux-ix86/phylobase-00check.html>

checking installed package size ... NOTE
installed size is 11.6Mb
sub-directories of 1Mb or more:
libs 10.4Mb

  [don't know if we can do anything about this, it's probably just from
building all of NCL?]

  There is another NOTE regarding partial matching which I hope to have
fixed on r-forge.

  The RUnit test output is *very* noisy at the moment.

  cheers
    Ben


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