[Phylobase-devl] labeling order

Peter Cowan pdc at berkeley.edu
Sat Dec 27 20:23:25 CET 2008

>  Hmm.
>  I've been working to try to make everything consistent in node order
> (as Steve suggested).  Thibaut/Marguerite, what do you suggest for the
> case of unrooted trees?  Thibaut, how often do you match up edges with
> data and labels?
>   I've done a bunch of stuff, and I'd like to commit it, because it's
> all reasonably consistent now, but I'd like to hear some more
> conversation -- I'm willing to work back through while it's fresh in
> my mind and do everything the opposite way (keeping everything
> in edge-matrix order all the time), provided we know how to handle
> unrooted trees (and are willing to live with not being able to handle
> reticulations).

If you want, we could easily make a branch that you could commit to,  
then we could have a look at how it works...

>  More discussion please?
> Ben
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