[Phylobase-commits] r549 - pkg/man

[noreply at r-forge.r-project.org]

Author: pdc
Date: 2009-08-21 02:28:46 +0200 (Fri, 21 Aug 2009)
New Revision: 549

Modified:
   pkg/man/phylo4d.Rd
Log:
document rownamesAslabels argument 

Modified: pkg/man/phylo4d.Rd
===================================================================
--- pkg/man/phylo4d.Rd	2009-08-21 00:28:16 UTC (rev 548)
+++ pkg/man/phylo4d.Rd	2009-08-21 00:28:46 UTC (rev 549)
@@ -23,7 +23,7 @@
 
 \usage{
      \S4method{phylo4d}{phylo4}(x, tip.data = NULL, node.data = NULL,
-        all.data = NULL, match.data = TRUE, merge.data = TRUE, ...)
+        all.data = NULL, match.data = TRUE, merge.data = TRUE, rownamesAsLabels = FALSE, ...)
      \S4method{phylo4d}{phylo}(x, tip.data = NULL, node.data = NULL,
         all.data = NULL, check.node.labels = c("keep", "drop", "asdata"), ...)
      \S4method{phylo4d}{matrix}(x, tip.data = NULL, node.data = NULL,
@@ -48,6 +48,9 @@
     argument is useful if the \code{phylo} object has non-unique node
     labels or node labels with informative data (e.g., posterior
     probabilities).}
+  \item{rownamesAsLabels}{(logical), in the case of number-like labels 
+    should the row names of the data provided be considered as labels 
+    (TRUE) or node numbers (FALSE and default)}
   \item{\dots}{further arguments to be passed to other methods. Used to
     control the validity checking of the created object (see \code{\link{formatData}}).}
 }