[Gsdesign-commits] r381 - pkg/gsDesign

[noreply at r-forge.r-project.org]

Author: keaven
Date: 2016-01-30 16:38:12 +0100 (Sat, 30 Jan 2016)
New Revision: 381

Modified:
   pkg/gsDesign/DESCRIPTION
   pkg/gsDesign/NAMESPACE
   pkg/gsDesign/NEWS
Log:
Removed url link that no longer exists in gsBinomialExact.Rd, updated NEWS, added importFrom in NAMESPACE, import from plyr in DESCRIPTION

Modified: pkg/gsDesign/DESCRIPTION
===================================================================
--- pkg/gsDesign/DESCRIPTION	2016-01-27 01:50:08 UTC (rev 380)
+++ pkg/gsDesign/DESCRIPTION	2016-01-30 15:38:12 UTC (rev 381)
@@ -1,10 +1,10 @@
 Package: gsDesign
-Version: 3.0-0
+Version: 3.0-1
 Title: Group Sequential Design
 Author: Keaven Anderson 
 Maintainer: Keaven Anderson <keaven_anderson at merck.com>
 Depends: R (>= 3.0.0), xtable, ggplot2
-Imports: plyr
+Imports: plyr, methods
 Suggests: knitr, scales
 VignetteBuilder: knitr 
 Description: Derives group sequential designs and describes their properties.

Modified: pkg/gsDesign/NAMESPACE
===================================================================
--- pkg/gsDesign/NAMESPACE	2016-01-27 01:50:08 UTC (rev 380)
+++ pkg/gsDesign/NAMESPACE	2016-01-30 15:38:12 UTC (rev 381)
@@ -1,5 +1,13 @@
 useDynLib(gsDesign)
 import(plyr, xtable, ggplot2)
+importFrom("graphics", "axis", "legend", "lines", "matplot",
+           "matpoints", "mtext", "par", "plot", "points", "strwidth",
+           "text")
+importFrom("methods", "is")
+importFrom("stats", "dbinom", "dnorm", "nlminb", "pbeta", "pbinom",
+          "pcauchy", "pchisq", "pnorm", "pt", "qbinom", "qcauchy",
+          "qchisq", "qnorm", "qt", "rbinom", "reshape", "uniroot")
+importFrom("utils", "packageVersion")
 export(gsBoundCP, gsCP, gsPP, gsPI, gsPOS, gsCPOS, gsDensity, gsPosterior)
 export(gsCPz, gsHR, gsDelta, gsBValue, gsRR, hrn2z, hrz2n, zn2hr)
 export(gsBound, gsBound1, gsDesign, gsProbability)

Modified: pkg/gsDesign/NEWS
===================================================================
--- pkg/gsDesign/NEWS	2016-01-27 01:50:08 UTC (rev 380)
+++ pkg/gsDesign/NEWS	2016-01-30 15:38:12 UTC (rev 381)
@@ -1,16 +1,8 @@
-2.9-4
-- Minor edit to package description to comply with R standards
+3.0-1, January, 2016
+- More changes to comply with R standards (in NAMESPACE - importFrom statements - and DESCRIPTION - adding plyr to imports) ensuring appropriate references.
+- Deleted link in documentation that no longer exists (gsBinomialExact.Rd).
 
-2.9-3, November, 2014
-- Added sfTrimmed as likely preferred spending function approach to skipping early or all interim efficacy analyses; this also can adjust bound when final analysis is performed with less than maximum planned information. Updated help(sfTrimmed) to demonstrate these capabilities.
-- Added sfGapped, which is primarily intended to eliminate futility analyses later in a study; see help(sfGapped) for an example
-- Added summary.spendfn to provide textual summary of spending functions; this simplified the print function for gsDesign objects
-- Added sfStep which can be used to set an interim spend when the exact amount of information is unknown; an example of how this can be misused is provided in the help file.
-- Fixed rounding so that gsBoundSummary, xtable.gsSurv and summary.gsDesign are consistent for gsSurv objects
 
-2.9-4, July, 2015
-- Added initial version of nBinomial1Sample to compute sample size and power for 1-sample binomial testing.
-
 3.0-0, December, 2015
 - Updated xtable extension to meet R standards for extensions. 
 - Fixed xtable.gsSurv and print.gsSurv to work with 1-sided designs
@@ -19,3 +11,12 @@
 - Cleaned up "imports" and "depends" in an effort to be an R "good citizen"
 - Registered S3 methods in NAMESPACE
 
+2.9-4
+- Minor edit to package description to comply with R standards
+
+2.9-3, November, 2014
+- Added sfTrimmed as likely preferred spending function approach to skipping early or all interim efficacy analyses; this also can adjust bound when final analysis is performed with less than maximum planned information. Updated help(sfTrimmed) to demonstrate these capabilities.
+- Added sfGapped, which is primarily intended to eliminate futility analyses later in a study; see help(sfGapped) for an example
+- Added summary.spendfn to provide textual summary of spending functions; this simplified the print function for gsDesign objects
+- Added sfStep which can be used to set an interim spend when the exact amount of information is unknown; an example of how this can be misused is provided in the help file.
+- Fixed rounding so that gsBoundSummary, xtable.gsSurv and summary.gsDesign are consistent for gsSurv objects