[GenABEL-dev] MixABEL compilation

[Nicola Pirastu]

Hi,

I have a working version which I got from Yakov, which we are still using, We have been using it on the latest R so it should compile anywhere. 
I think that the error Maarten gets is still the one linked to the check version of DatABEL.
I can send it to you if you like.

Best.

Nicola


Il giorno 10/ago/2014, alle ore 21:33, Maarten Kooyman <kooyman at gmail.com> ha scritto:

> Hi Lennart,
> 
> I did install MixABEL from the file MixABEL_0.1-2.tar.gz under R 2.15. I think I got it from Nicola, but I can't recall exactly.
> 
> I tried to install the file under R 3.1.0 (R CMD INSTALL MixABEL_0.1-2.tar.gz ) and it failed (after same compiler warning) with:
> 
> installing to /home/mkooyman/R/x86_64-pc-linux-gnu-library/3.1/MixABEL/libs
> ** R
> ** inst
> ** preparing package for lazy loading
> Error : .onAttach failed in attachNamespace() for 'DatABEL', details:
>  call: if (pkgVersion != cranVersion) {
>  error: argument is of length zero
> Error : package ‘DatABEL’ could not be loaded
> ERROR: lazy loading failed for package ‘MixABEL’
> * removing ‘/home/mkooyman/R/x86_64-pc-linux-gnu-library/3.1/MixABEL’
> 
> Kind regards,
> 
> Maarten
> 
> 
> On 10-08-14 17:11, L.C. Karssen wrote:
>> Hi Maarten,
>> 
>> I seem to remember that you compiled MixABEL a couple of months ago. Did
>> you use the version on CRAN or the one from SVN?
>> 
>> We tried to install the CRAN version today and it failed with a GCC
>> error (we needed to add -fpermissive to src/Makevars to fix it), but
>> building from SVN currently fails miserably (I presume because of the
>> stricter CRAN checks).
>> How did you handle this?
>> 
>> 
>> Best,
>> 
>> Lennart.
> 
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