[GenABEL-dev] Fwd: C++ which is not valid C++11 in CRAN package DatABEL

[Yurii Aulchenko]

Thank you very much! - time for genabel resubmission... Dread it a bit
as other request was to put all the data in separate package...

----------------------
Yurii Aulchenko
(sent from mobile device)

> On Nov 6, 2013, at 14:22, "L.C. Karssen" <lennart at karssen.org> wrote:
>
> I added  -Wall -std=c++11 to the Makefile in pkg/filevector/. This
> resulted in an error  (about an ambiguous isnan() function definition)
> The fix in SVN r.1361 fixes that error.
>
> Hopefully that's enough. If not, let me know.
>
>
> Lennart.
>
>> On 11/06/2013 11:37 AM, Yurii Aulchenko wrote:
>> FYI
>>
>> I expect this is the same code (filevector?) as that in previous FYI
>> causing complains
>>
>> ---------- Forwarded message ----------
>> From: *Prof Brian Ripley* <ripley at stats.ox.ac.uk
>> <mailto:ripley at stats.ox.ac.uk>>
>> Date: Wed, Nov 6, 2013 at 10:20 AM
>> Subject: C++ which is not valid C++11 in CRAN package DatABEL
>> To: yurii at bionet.nsc.ru <mailto:yurii at bionet.nsc.ru>
>>
>>
>> We now have compilers (gcc 4.8.2, clang with libcxx headers) with
>> fairly complete C++11 support (which can be selected by -std=c++11).
>> At least one of these is showing compilation errors on your package,
>> which were in many cases warnings under earlier versions of g++
>> (provided -Wall was used: see 'Writing R Extensions').  People are
>> pressing that this become the default where supported.
>>
>> You can see the compilation logs at e.g.
>> http://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/BiasedUrn-00check.html
>> and
>> http://www.stats.ox.ac.uk/pub/bdr/memtests/ASAN/BiasedUrn.log .
>>
>>
>> Please submit an update to CRAN (following the CRAN policies) at
>> http://cran.r-project.org/web/packages/policies.html.  Do NOT reply to
>> this email to submit an update!
>>
>> There may be other issues that need fixing: see the CRAN check logs at
>> http://cran.r-project.org/web/checks/check_results_NAME.html,
>> replacing NAME by the name of your package.
>>
>>
>>
>> --
>> -----------------------------------------------------
>> Yurii S. Aulchenko
>>
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>>
>>
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>
> --
> *-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
> L.C. Karssen
> Utrecht
> The Netherlands
>
> lennart at karssen.org
> http://blog.karssen.org
> GPG key ID: A88F554A
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