[GenABEL-dev] Fwd: C++ which is not valid C++11 in CRAN package DatABEL

L.C. Karssen lennart at karssen.org
Wed Nov 6 14:22:12 CET 2013


I added  -Wall -std=c++11 to the Makefile in pkg/filevector/. This
resulted in an error  (about an ambiguous isnan() function definition)
The fix in SVN r.1361 fixes that error.

Hopefully that's enough. If not, let me know.


Lennart.

On 11/06/2013 11:37 AM, Yurii Aulchenko wrote:
> FYI
> 
> I expect this is the same code (filevector?) as that in previous FYI
> causing complains
> 
> ---------- Forwarded message ----------
> From: *Prof Brian Ripley* <ripley at stats.ox.ac.uk
> <mailto:ripley at stats.ox.ac.uk>>
> Date: Wed, Nov 6, 2013 at 10:20 AM
> Subject: C++ which is not valid C++11 in CRAN package DatABEL
> To: yurii at bionet.nsc.ru <mailto:yurii at bionet.nsc.ru>
> 
> 
> We now have compilers (gcc 4.8.2, clang with libcxx headers) with
> fairly complete C++11 support (which can be selected by -std=c++11).
> At least one of these is showing compilation errors on your package,
> which were in many cases warnings under earlier versions of g++
> (provided -Wall was used: see 'Writing R Extensions').  People are
> pressing that this become the default where supported.
> 
> You can see the compilation logs at e.g.
> http://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/BiasedUrn-00check.html
> and
> http://www.stats.ox.ac.uk/pub/bdr/memtests/ASAN/BiasedUrn.log .
> 
> 
> Please submit an update to CRAN (following the CRAN policies) at
> http://cran.r-project.org/web/packages/policies.html.  Do NOT reply to
> this email to submit an update!
> 
> There may be other issues that need fixing: see the CRAN check logs at
> http://cran.r-project.org/web/checks/check_results_NAME.html,
> replacing NAME by the name of your package.
> 
> 
> 
> -- 
> -----------------------------------------------------
> Yurii S. Aulchenko
> 
> [ LinkedIn <http://nl.linkedin.com/in/yuriiaulchenko> ] [ Twitter
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> <http://yurii-aulchenko.blogspot.nl/> ]
> 
> 
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-- 
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L.C. Karssen
Utrecht
The Netherlands

lennart at karssen.org
http://blog.karssen.org
GPG key ID: A88F554A
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