[GenABEL-dev] a problem of illegal genotype (three alleles)

[Yurii Aulchenko]

Dear Chalika,

This list is dedicated to the discussion related to the development of the
GenABEL suite and project, but not to the user support.

Therefore I think you question is better suited for the forum.genabel.org.
It is also quite likely that you will find some information answering your
question over there.

best regards,
Yurii

On Thu, Mar 28, 2013 at 10:05 AM, Wangdee, C. <C.Wangdee1 at uu.nl> wrote:

>  Dear,****
>
> ** **
>
> I am working with the data set of GWAS on GenABEL. I found a problem when
> I run a command convert.snp.ped.****
>
> The program said “Error in convert.snp.ped("pedin1.txt", "map.txt",
> "genokooi.raw") : ****
>
>   illegal genotype (three alleles) snp 'BICF2G630100019' file 'pedin1.txt'
> line 91 !”****
>
> I tried to manage and get new pedin but the problem cannot solve.****
>
> Could you please help me on this problem?****
>
> ** **
>
> Best regards,****
>
> Chalika****
>
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> genabel-devel at lists.r-forge.r-project.org
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>



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