[GenABEL-dev] a problem of illegal genotype (three alleles)

[Wangdee, C.]

Dear,

I am working with the data set of GWAS on GenABEL. I found a problem when I run a command convert.snp.ped.
The program said "Error in convert.snp.ped("pedin1.txt", "map.txt", "genokooi.raw") :
  illegal genotype (three alleles) snp 'BICF2G630100019' file 'pedin1.txt' line 91 !"
I tried to manage and get new pedin but the problem cannot solve.
Could you please help me on this problem?

Best regards,
Chalika
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