[GenABEL-dev] Question about a fix for bug #1432 (default strand in exported file)

[L.C. Karssen]

Dear list,

I would like to fix Bug #1432, "convert.snp.tped() uses "+" as default
option for 'strand', using "u" would be more appropriate".
https://r-forge.r-project.org/tracker/index.php?func=detail&aid=1432&group_id=505&atid=2058

Does anybody know a reason why the default strand should not be "u"?
According to the documentation convert.snp.ped() already has "u" as
default, so why not do the same for the tped export?

Unless I hear an argument against this fix within a couple of days, I'll
go ahead and implement it. 

Of course we should announce this change in default behaviour explicitly
when releasing the next version of GenABEL. 


Thanks for sharing your thoughts on this,

Lennart.
-- 
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L.C. Karssen
Erasmus MC
Department of Epidemiology
Room Ee2224

Postbus 2040
3000 CA Rotterdam
The Netherlands

phone: +31-10-7044217
fax: +31-10-7044657
email: l.karssen at erasmusmc.nl
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