[Genabel-commits] r1252 - tutorials/OmicABEL

noreply at r-forge.r-project.org noreply at r-forge.r-project.org
Sat Jun 29 12:25:49 CEST 2013


Author: yurii
Date: 2013-06-29 12:25:48 +0200 (Sat, 29 Jun 2013)
New Revision: 1252

Modified:
   tutorials/OmicABEL/exampleOfUse.org
Log:
added note about use of DOUBLE

Modified: tutorials/OmicABEL/exampleOfUse.org
===================================================================
--- tutorials/OmicABEL/exampleOfUse.org	2013-06-27 21:09:18 UTC (rev 1251)
+++ tutorials/OmicABEL/exampleOfUse.org	2013-06-29 10:25:48 UTC (rev 1252)
@@ -188,6 +188,14 @@
 : Ncells  364098 19.5     667722  35.7   467875  25.0
 : Vcells 3105774 23.7   17089802 130.4 20039530 152.9
 
+Note that in real life you are most likley to use one of the 
+GenABEL conversion procedures to convert your data from IMPUTE, 
+MACH, or MiniMac to DatABEL/filevector. The functions are 
+impute2databel, mach2databel, and minimac2databel. {\bf 
+Make sure you use the 'dataOutType = "DOUBLE"' argument when 
+doing conversion! - OmicABEL currently accepts only DOUBLE format 
+for all inputs}
+
 ** Export the data in format for FaST-LMM
 We are going to compare the OmicABEL results with FaST-LMM, and
 therefore will export the results in a format usable for FaST-LMM as



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