[Genabel-commits] r687 - pkg/webpages
noreply at r-forge.r-project.org
noreply at r-forge.r-project.org
Tue Mar 8 00:25:00 CET 2011
Author: yurii
Date: 2011-03-08 00:24:59 +0100 (Tue, 08 Mar 2011)
New Revision: 687
Added:
pkg/webpages/developers.html
Modified:
pkg/webpages/acknowledgements.html
pkg/webpages/contribute.html
pkg/webpages/home.html
pkg/webpages/people.html
pkg/webpages/support.html
Log:
some content changes + devel page
Modified: pkg/webpages/acknowledgements.html
===================================================================
--- pkg/webpages/acknowledgements.html 2011-03-07 22:52:34 UTC (rev 686)
+++ pkg/webpages/acknowledgements.html 2011-03-07 23:24:59 UTC (rev 687)
@@ -17,7 +17,7 @@
<a href="http://www.bionet.nsc.ru">Institute of Cytology & Genetics SD RAS</a>
(Prof. Alexander N. Kolchanov),
Novosibirsk, Russia; and by
-<a href="http://www.biouml.org/">BioUML/ISB/DOtE</a> (Dr. Fedor Kolpakov).
+<a href="http://www.biouml.org/">BioUML/ISB/DotE</a> (Dr. Fedor Kolpakov).
</p>
<p>
Modified: pkg/webpages/contribute.html
===================================================================
--- pkg/webpages/contribute.html 2011-03-07 22:52:34 UTC (rev 686)
+++ pkg/webpages/contribute.html 2011-03-07 23:24:59 UTC (rev 687)
@@ -1,54 +1,36 @@
<p>
-There are many ways in which you can contribute, and we are open for suggestions.
-Here is a list of things you can do to help us, and surely you will get acknowledged
-(see People section [ <a href="http://test.genabel.org/drupal6/?q=node/83">People</a> ])
+There are many ways in which you can contribute to the GenABEL project,
+and we are open for suggestions.
+Here is an (incomplete) list of things you can do to help us with.
</p>
<h3>Web-site</h3>
<p>
While you are browsing through this web-site, you may find broken links or
some inconsistencies. We will appreciate if you report these to the web-site
-admin ( ADDRESS ). Your help will be acknowledged at "People" section
-[ <a href="http://test.genabel.org/drupal6/?q=node/83">People</a> ]
+admin ( ADDRESS ).
</p>
<h3>Help users</h3>
<p>
If you are experienced GenABEL user, subscribe to the GenABEL forum
[ <a href="http://forum.genabel.org">GenABEL forum</a> ],
-and answer questions from other users. Your contribution will be
-acknowledged at "People" section
-[ <a href="http://test.genabel.org/drupal6/?q=node/83">People</a> ],
-and we will also assign an 'expert' icon for you on the forum
-[ <a href="http://forum.genabel.org">GenABEL forum</a> ]
+and help answering questions from other users.
</p>
<h3>Bug reporting</h3>
<p>
-If you identify a bug, please submit a bug report
-(see [ <a href="http://test.genabel.org/drupal6/?q=node/5#bug">Bug reporting</a> ]).
-Your contribution will be
-acknowledged at "People" section
-[ <a href="http://test.genabel.org/drupal6/?q=node/83">People</a> ],
-and we will also assign a 'bug reporter' icon for you on the forum
-[ <a href="http://forum.genabel.org">GenABEL forum</a> ]
-<br>
-<em>Further information:</em> please read "How to report a bug"
+If you think you have identified a bug, please discuss that at the
+forum [ FORUM ], and submit it to the developers
+[ How to report a bug ].
</p>
<h3>Cleaning up the documentation</h3>
<p>
-You can help cleaning up the documentation: there are many grammatical errors
-there, awkward phrasing, and unclear parts. If you are willing to do that,
+You can help cleaning up the documentation: there are some grammatical errors,
+awkward phrasing, and unclear parts. If you are willing to do that,
please contact one of the coordinators
-(see [ <a href="http://test.genabel.org/drupal6/?q=node/83">People</a> ]).
-Your contribution will be
-acknowledged at "People" section
-[ <a href="http://test.genabel.org/drupal6/?q=node/83">People</a> ],
-and we will also assign a 'doc writer' icon for you on the forum
-[ <a href="http://forum.genabel.org">GenABEL forum</a> ]
-<br>
-<em>Further information:</em> please read "How to help with documentation"
+(see [ <a href="/drupal6/?q=people">People</a> ]).
</p>
<h3>Contribute a tutorial</h3>
@@ -59,29 +41,18 @@
(genabel-devel [at] lists [dot] r-forge [dot] r-project [dot] org) with your
suggestion. We then will discuss how how to do that in the best way
(e.g. we mostly use Sweave for developing the tutorials).
-Your contribution will be
-acknowledged at "People" section
-[ <a href="http://test.genabel.org/drupal6/?q=node/83">People</a> ],
-and we will also assign a 'doc writer' icon for you on the forum
-[ <a href="http://forum.genabel.org">GenABEL forum</a> ]
</p>
-<h3>Dealing with bugs and adding new features</h3>
+<h3>Fixing the bugs and adding new features</h3>
<p>
There are few bugs, and also missing features in GenABEL suite
[ <a href="https://r-forge.r-project.org/tracker/?group_id=505">GenABEL tracker</a> ].
We will greatly appreciate your help in fixing the bugs and adding new features.
If you'd like to do that, please send an e-mail to the genabel-dev list
(genabel-devel [at] lists [dot] r-forge [dot] r-project [dot] org) with your
-suggestion to co-ordinate your efforts in a case somebody is already working on that, and
-eventually contribute a patch.
-Your contribution will be
-acknowledged at "People" section
-[ <a href="http://test.genabel.org/drupal6/?q=node/83">People</a> ] ,
-and we will also assign a 'contributor' icon for you on the forum
-[ <a href="http://forum.genabel.org">GenABEL forum</a> ].
-<br>
+suggestion to co-ordinate your efforts.
<em>Further information:</em> please read "How to contribute a patch"
+[ How to contribute a patch ]
</p>
<h3>New functionality</h3>
@@ -89,17 +60,12 @@
If you got bright new methodological idea, and you think it may fit
into GenABEL suite framework (as a function or as a package),
to start with,
-please contact the co-ordinators through
+please contact us through
the genabel-devel list
(genabel-devel [at] lists [dot] r-forge [dot] r-project [dot] org) with your
suggestion to co-ordinate your efforts in a case somebody is already working
on similar or related project.
-When you contribute the code, your contribution will be
-acknowledged at "People" section
-[ <a href="http://test.genabel.org/drupal6/?q=node/83">People</a> ],
-and we will also assign a 'developer' icon for you on the forum
-[ <a href="http://forum.genabel.org">GenABEL forum</a> ]
-<br>
<em>Further information:</em> please read "How to contribute a package"
+[ How to contribute a package ]
</p>
Added: pkg/webpages/developers.html
===================================================================
--- pkg/webpages/developers.html (rev 0)
+++ pkg/webpages/developers.html 2011-03-07 23:24:59 UTC (rev 687)
@@ -0,0 +1,3 @@
+GenABEL's project developers' pages are kept at RForge.
+<p></p>
+Link to <a href="http://genabel.r-forge.r-project.org/">GenABEL RForge pages</a>
\ No newline at end of file
Modified: pkg/webpages/home.html
===================================================================
--- pkg/webpages/home.html 2011-03-07 22:52:34 UTC (rev 686)
+++ pkg/webpages/home.html 2011-03-07 23:24:59 UTC (rev 687)
@@ -12,16 +12,18 @@
software packages. Packages of GenABEL suite are
</p>
<ul>
-<li>Reach in functionality. Many packages with 100+ functions related to genomic analysis [ Packages ]</li>
+<li>Reach in functionality. Many packages with 100+ functions related to genomic analysis
+[ Packages ]</li>
<li>Efficient. Meaning you can run a
genome-wide association scan on a netBook [ Tutorials-Running1000gGWASonNetBook ] </li>
<li>Flexible. Programming your custom analysis is easy [ Tutorials-RunningCustomAnalysis ] </li>
<li>Open, transparent, free. Most of the code released under GNU GPL [ License ]</li>
-<li>Well documented. More then 200 pages of reference manuals and about 300 pages of tutorials [ Tutorials | Manuals ]</li>
+<li>Well documented. More then 200 pages of reference manuals and about 300 pages of tutorials
+[ Tutorials | Manuals ]</li>
<li>Supported. By community [ Forum ] </li>
<li>Collaborative. Community is open for your contribution [ Contribute ] </li>
</ul>
-News and news feed
+Here we need News and news feed
Google Analytics script
Modified: pkg/webpages/people.html
===================================================================
--- pkg/webpages/people.html 2011-03-07 22:52:34 UTC (rev 686)
+++ pkg/webpages/people.html 2011-03-07 23:24:59 UTC (rev 687)
@@ -2,15 +2,14 @@
<ul>
<li>Yurii Aulchenko (yurii [dot] aulchenko [at] gmail [dot] com): project coordinator</li>
<li>Lennart Karssen (l [dot] karssen [at] erasmusmc [dot] nl): admin for GenABEL at R-forge & GenABEL.org</li>
+<li>Anatoly Kirichenko (kianvl [at] mail [dot] ru): web-site admin</li>
</ul>
<h3>Novel methodology</h3>
<ul>
<li>Grammar: Yurii Aulchenko, Chris Haley, DJ de Koning</li>
-<li>Grammar+: Gulnara Svischeva, Tatiana Axenovich, Yurii Aulchenko</li>
<li>GenABEL::cocohet: Fan Liu, Maksim Struchalin</li>
<li>Variance heterogeneity analysis (VariABEL): Maksim Struchalin</li>
-<li>LiLo: Nicola Pirastu</li>
<li>MixABEL::FastMixedModel: William Astle, David Balding</li>
<li>MixABEL::GWFGLS: Yurii Aulchenko</li>
<li>Parallelization: Unitsa Sangket, Surakameth Mahasirimongkol, Yurii Aulchenko</li>
@@ -48,16 +47,21 @@
</p>
<p>
-<h3>User support</h3>
-[we will see who are actively answering questions on forum.genabel.org]
+<h3>Web-site support</h3>
+[we will see who will contribute]
</p>
<p>
-<h3>Web-site support</h3>
-[we will see who will contribute]
+<h3>Forum: moderators</h3>
+Maria Gonik
</p>
<p>
+<h3>Forum: user support</h3>
+[we will see who are actively answering questions on forum.genabel.org]
+</p>
+
+<p>
<h3>Note</h3>
Large part of GenABEL packages are R-package, and we greatly appreciate work done by <a href="http://www.r-project.org">R</a> team, <a href="http://cran.r-project.org/">CRAN</a>, and <a href="http://r-forge.r-project.org/">R-forge</a>
</p>
Modified: pkg/webpages/support.html
===================================================================
--- pkg/webpages/support.html 2011-03-07 22:52:34 UTC (rev 686)
+++ pkg/webpages/support.html 2011-03-07 23:24:59 UTC (rev 687)
@@ -7,13 +7,15 @@
<li>Look through general GenABEL tutorial [ <a href="http://test.genabel.org/drupal6/?q=htmlTut">Tutorials</a> ] and decide on what package to use [ <a href="http://test.genabel.org/drupal6/?q=node/6">Packages</a> ]</li>
<li>Carefully read tutorial (if available) section specific to your analyses, figure out what functions you need to use, run the examples</li>
<li>Read help pages for relevant functions (in R, use 'help(functionname)'; or see Manuals section [ <a href="http://test.genabel.org/drupal6/?q=node/84">Manuals</a> ])</li>
-<li>If it is still not clear how to run analysis, ask your question at GenABEL forum [ <a href="http://forum.genabel.org">GenABEL forum</a> ] </li>
+<li>If it is still not clear how to run analysis, search GenABEL forum [ <a href="http://forum.genabel.org">GenABEL forum</a> ] </li>
+<li>If no answer, ask your question at the GenABEL forum [ <a href="http://forum.genabel.org">GenABEL forum</a> ]</li>
</ul>
<em>I want to do some special analysis, which does not seem to be supported. How can I figure out if there is a workaround or if this is a planned feature?</em>
<ul>
<li>Look through general GenABEL tutorial [ <a href="http://test.genabel.org/drupal6/?q=htmlTut">Tutorials</a> ]</li>
<li>Search Tutorials [ <a href="http://test.genabel.org/drupal6/?q=htmlTut">Tutorials</a> ] and Manuals [ <a href="http://test.genabel.org/drupal6/?q=node/84">Manuals</a> ]</li>
+<li>Search GenABEL forum [ <a href="http://forum.genabel.org">GenABEL forum</a> ] </li>
<li>If you can not find anything, ask your question at GenABEL forum [ <a href="http://forum.genabel.org">GenABEL forum</a> ]. See <a href="http://forum.genabel.org/viewtopic.php?f=6&t=15">example</a></li>
<li>If no answer, contact developers to file in feature request genabel-devel [at] lists [dot] r-forge [dot] r-project [dot] org</li>
</ul>
@@ -22,6 +24,8 @@
<em>A command behaves not in a way I expect, is that a bug?</em>
<ul>
<li>Read help pages for the functions (in R, use 'help(functionname)'; or see Manuals section [ <a href="http://test.genabel.org/drupal6/?q=node/84">Manuals</a> ])</li>
+<li>Search GenABEL forum [ <a href="http://forum.genabel.org">GenABEL forum</a> ] </li>
<li>If still not solved, post suggested bug at GenABEL forum [ <a href="http://forum.genabel.org">GenABEL forum</a> ]. See an <a href="http://forum.genabel.org/viewtopic.php?f=6&t=4">example here</a>.</li>
+<li>If no answer, contact developers to file in feature request genabel-devel [at] lists [dot] r-forge [dot] r-project [dot] org</li>
</ul>
More information about the Genabel-commits
mailing list