[Esm-commits] r36 - pkg/ESM/man

[noreply at r-forge.r-project.org]

Author: timotheepoisot
Date: 2010-08-29 13:59:20 +0200 (Sun, 29 Aug 2010)
New Revision: 36

Added:
   pkg/ESM/man/esm.Rd
Log:
Add a help page for the main package

Added: pkg/ESM/man/esm.Rd
===================================================================
--- pkg/ESM/man/esm.Rd	                        (rev 0)
+++ pkg/ESM/man/esm.Rd	2010-08-29 11:59:20 UTC (rev 36)
@@ -0,0 +1,13 @@
+\name{ESM} 
+\Rdversion{1.1} 
+\alias{ESM} 
+\title{Ecological specificity measures - main page}
+\description{Returns an interaction matrix normalized to 1}
+
+\details{Values of \kbd{measure} can be : \kbd{hr}, the classical host range; \kbd{ssi}, the species specialization index; \kbd{dfp}, the DFP index; \kbd{shannon}, Shannon's entropy; \kbd{wadfp}, the weighted additive DFP.}
+
+\references{For DFP and WADFP, and this package, cite : Poisot, T & Hochberg, M E "..." XXX.
+
+For HS, cite : Schug J, et al. (2005) Promoter features related to tissue specificity as measured by Shannon entropy. Genome biology 6(4):R33
+
+For SSI, cite : Julliard R, Clavel J, Devictor V, Jiguet F, & Couvet D (2006) Spatial segregation of specialists and generalists in bird communities. Ecology Letters 9(11):1237-1244.}
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