[Esm-commits] r35 - in pkg/ESM: . man
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Sun Aug 29 12:30:19 CEST 2010
Author: timotheepoisot
Date: 2010-08-29 12:30:19 +0200 (Sun, 29 Aug 2010)
New Revision: 35
Modified:
pkg/ESM/DESCRIPTION
pkg/ESM/man/getspe.Rd
pkg/ESM/man/matrix.hr.Rd
Log:
Changed some points of the doc and updated the revision number
Modified: pkg/ESM/DESCRIPTION
===================================================================
--- pkg/ESM/DESCRIPTION 2010-08-29 10:00:17 UTC (rev 34)
+++ pkg/ESM/DESCRIPTION 2010-08-29 10:30:19 UTC (rev 35)
@@ -1,11 +1,11 @@
Package: ESM
-Version: 1.2.0-05
-Date: 2010-08-28
+Version: 1.2.0-06
+Date: 2010-08-29
Title: Ecological Specificity Measures
Author: Timothee Poisot <tpoisot at um2.fr>
Maintainer: Timothee Poisot <tpoisot at um2.fr>
Depends: R (>= 2.1.0)
-Suggests: vegan, bipartite, ade4
+Suggests: vegan, bipartite
Description: Performs several measures of ecological specificity
License: GPL (>= 2)
URL: http://www.timotheepoisot.fr/
\ No newline at end of file
Modified: pkg/ESM/man/getspe.Rd
===================================================================
--- pkg/ESM/man/getspe.Rd 2010-08-29 10:00:17 UTC (rev 34)
+++ pkg/ESM/man/getspe.Rd 2010-08-29 10:30:19 UTC (rev 35)
@@ -18,7 +18,7 @@
\details{Values of \kbd{measure} can be : \kbd{rr}, the classical resource range; \kbd{ssi}, the species specialization index; \kbd{lsd}, the Link Strength Difference index; \kbd{hs}, Shannon's entropy.}
-\references{For LSD, and this package, cite : Poisot, T, Canard E, Mouquet N & Hochberg, M E "..." XXX.
+\references{For PDI, and this package, cite : Poisot, T, Canard E, Mouquet N & Hochberg, M E "..." XXX.
For HS, cite : Schug J, et al. (2005) Promoter features related to tissue specificity as measured by Shannon entropy. Genome biology 6(4):R33
Modified: pkg/ESM/man/matrix.hr.Rd
===================================================================
--- pkg/ESM/man/matrix.hr.Rd 2010-08-29 10:00:17 UTC (rev 34)
+++ pkg/ESM/man/matrix.hr.Rd 2010-08-29 10:30:19 UTC (rev 35)
@@ -12,5 +12,5 @@
}
\value{
- \item{matrix}{A 0/1 interaction matrix}
+ \item{matrix}{A 0/1 (binary) interaction matrix}
}
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