[Boostheaders-devel] [Bioc-devel] Boost packaged on rforge
Dirk Eddelbuettel
edd at debian.org
Sat May 4 05:16:09 CEST 2013
On 3 May 2013 at 22:56, Jay Emerson wrote:
| Nice! I'll try to test with bigmemory et.al. here, and maybe we can talk
| through some things in Chicago in two weeks.
I needed bigmemory from SVN anyway to build a new BH, but I only tested with
your last CRAN release -- which installed fine (again, with my
/usr/include/boost renamed and hidden). So things look good.
We can surely talk in Chicago, but if you get a chance to 'svn up' for BH and
give it a spin I'd appreciate it. I think a 1.51.0-1 release is pretty low risk.
Dirk
| Jay
|
|
| On Fri, May 3, 2013 at 9:48 PM, Dirk Eddelbuettel <edd at debian.org> wrote:
|
|
| To extend this thread a little:
|
| i) I put a little bit of time the BH package and extended the package,
| trying to address the open issues at
| https://r-forge.r-project.org/tracker/?atid=5310&group_id=1469&
| func=browse
| (which, sadly, Steffen never seems to have found, but I added his
| issue)
|
| ii) Now 'foreach' (#2527) and 'math/dist.' (#2533, also needed
| 'algorithm')
| are included.
|
| iii) I can now build bigmemory, RcppBDT, and ExactNumCI (the driver for #
| 2533)
| even when 'hiding' my /usr/include/boost/ -- so package BH works
| here!
|
| (Both RcppBDT and ExactNumCI, as currently on CRAN, need LinkingTo:
| BH,
| of course, and note that ExactNumCI has a bug in src/Makefile:
| remove
| BOOSTLIB which is eg unset on my system and breaks the build; I'll
| talk
| to them in due course.)
|
| iv) Steffen's wish was added as ticket #2768 and has been addressed,
| iostream is in as well but I didn't test mzR yet
|
| I think we are crouching towards a BH release 1.51.0-1 and I'd love for
| anybody else to test a little.
|
| Dirk
|
| --
| Dirk Eddelbuettel | edd at debian.org | http://dirk.eddelbuettel.com
|
|
|
|
| --
| John W. Emerson (Jay)
| Associate Professor of Statistics, Adjunct, and Director of Graduate Studies
| Department of Statistics
| Yale University
| http://www.stat.yale.edu/~jay
--
Dirk Eddelbuettel | edd at debian.org | http://dirk.eddelbuettel.com
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