[Boostheaders-devel] [Bioc-devel] Boost packaged on rforge

Dirk Eddelbuettel edd at debian.org
Sat May 4 05:16:09 CEST 2013


On 3 May 2013 at 22:56, Jay Emerson wrote:
| Nice!  I'll try to test with bigmemory et.al. here, and maybe we can talk
| through some things in Chicago in two weeks.

I needed bigmemory from SVN anyway to build a new BH, but I only tested with
your last CRAN release -- which installed fine (again, with my
/usr/include/boost renamed and hidden).  So things look good.

We can surely talk in Chicago, but if you get a chance to 'svn up' for BH and
give it a spin I'd appreciate it.  I think a 1.51.0-1 release is pretty low risk.

Dirk
 
| Jay
| 
| 
| On Fri, May 3, 2013 at 9:48 PM, Dirk Eddelbuettel <edd at debian.org> wrote:
| 
| 
|     To extend this thread a little:
| 
|     i)   I put a little bit of time the BH package and extended the package,
|          trying to address the open issues at
|            https://r-forge.r-project.org/tracker/?atid=5310&group_id=1469&
|     func=browse
|          (which, sadly, Steffen never seems to have found, but I added his
|     issue)
| 
|     ii)  Now 'foreach' (#2527) and 'math/dist.' (#2533, also needed
|     'algorithm')
|          are included.
| 
|     iii) I can now build bigmemory, RcppBDT, and ExactNumCI (the driver for #
|     2533)
|          even when 'hiding' my /usr/include/boost/ -- so package BH works
|     here!
| 
|          (Both RcppBDT and ExactNumCI, as currently on CRAN, need LinkingTo:
|     BH,
|          of course, and note that ExactNumCI has a bug in src/Makefile:
|     remove
|          BOOSTLIB which is eg unset on my system and breaks the build; I'll
|     talk
|          to them in due course.)
| 
|     iv)  Steffen's wish was added as ticket #2768 and has been addressed,
|          iostream is in as well but I didn't test mzR yet
| 
|     I think we are crouching towards a BH release 1.51.0-1 and I'd love for
|     anybody else to test a little.
|    
|     Dirk
|    
|     --
|     Dirk Eddelbuettel | edd at debian.org | http://dirk.eddelbuettel.com
| 
| 
| 
| 
| --
| John W. Emerson (Jay)
| Associate Professor of Statistics, Adjunct, and Director of Graduate Studies
| Department of Statistics
| Yale University
| http://www.stat.yale.edu/~jay

-- 
Dirk Eddelbuettel | edd at debian.org | http://dirk.eddelbuettel.com


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