[Biomod-commits] (no subject)

[Jenny Williams]

I am still trying to get my head around biomod2. I have run through the tutorial a few times, which works really well in a linear format.

But, I want to see the models and assess them at every part of the process. So, I need to:

1: be able to re-access all the files from /.BIOMOD_DATA/ once R is closed and all the file links are lost.
e.g myBiomodModelOut

2: call the summary parameters for the models e.g GLM, I can see the files but not sure how to access them.
e.g
>myGLMs <- BIOMOD_LoadModels(myBiomodModelOut, models='GLM')
#just produces a list
>summary(myGLMs[1])
   Length     Class      Mode
   1 character character
#summary(GLM) doesn't work, but is the output that I am looking to find.

3. find the split datasets used for each of the iterations BIOMOD_Modeling options; NbRunEval for DataSplit

Any help or pointers in the right direction would be greatly appreciated.
FYI the vignette does not seem to work: http://127.0.0.1:15505/library/biomod2/doc/index.html



******************
Jenny Williams
Spatial Information Scientist, GIS Unit
Herbarium, Library, Art & Archives Directorate
Royal Botanic Gardens, Kew
Richmond, TW9 3AB, UK

Tel: +44 (0)208 332 5277
email: jenny.williams at kew.org<mailto:jenny.williams at kew.org>
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