[Basta-users] bug setting nburnin and niter?

Colchero, Fernando Colchero at demogr.mpg.de
Fri Nov 4 07:36:25 CET 2011


Hi Cliff,

   The argument for the burnin should be 'burnin' not, 'nburnin'... That should fix it.

   Best,

   Fernando


______________________________________________
 
Fernando Colchero

Max Planck Institute for Demographic Research
Konrad Zuse Str. 1, 18057, Rostock, Germany
Tel:  +49 (0) 381 2081 113
Fax: +49 (0) 381 2081 529
E-mail: Colchero at demogr.mpg.de
______________________________________________





On Nov 3, 2011, at 3:42 PM, Cliff Cunningham wrote:


	Dear Fernando,

	I have the program up and running for 50k iterations.

	I tried to set it up for 1K iterations, but I kept getting an error message that "nburnin is larger than niter", though I had set it to be smaller:

	out <- basta(object = Males.dat$newData, studyStart = 1978, studyEnd = 1982,   nburnin=100, niter=1000, nsim=6, parallel=TRUE, ncpus=6,
	model = "LO", shape = "bathtub")

	Owen Jones looked at my run and thought it might be a bug.

	
	All the best!

	    Cliff Cunningham


	        Professor
	Biology Department
	     Duke University
	        130 Science Drive
	Durham NC 27708
	
	Phone 919-660-7356
	

	http://www.biology.duke.edu/cunningham




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