[Basta-users] bug setting nburnin and niter?
Colchero, Fernando
Colchero at demogr.mpg.de
Fri Nov 4 07:36:25 CET 2011
Hi Cliff,
The argument for the burnin should be 'burnin' not, 'nburnin'... That should fix it.
Best,
Fernando
______________________________________________
Fernando Colchero
Max Planck Institute for Demographic Research
Konrad Zuse Str. 1, 18057, Rostock, Germany
Tel: +49 (0) 381 2081 113
Fax: +49 (0) 381 2081 529
E-mail: Colchero at demogr.mpg.de
______________________________________________
On Nov 3, 2011, at 3:42 PM, Cliff Cunningham wrote:
Dear Fernando,
I have the program up and running for 50k iterations.
I tried to set it up for 1K iterations, but I kept getting an error message that "nburnin is larger than niter", though I had set it to be smaller:
out <- basta(object = Males.dat$newData, studyStart = 1978, studyEnd = 1982, nburnin=100, niter=1000, nsim=6, parallel=TRUE, ncpus=6,
model = "LO", shape = "bathtub")
Owen Jones looked at my run and thought it might be a bug.
All the best!
Cliff Cunningham
Professor
Biology Department
Duke University
130 Science Drive
Durham NC 27708
Phone 919-660-7356
http://www.biology.duke.edu/cunningham
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