<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Hi Cliff,<div><br></div><div> The argument for the burnin should be 'burnin' not, 'nburnin'... That should fix it.</div><div><br></div><div> Best,</div><div><br></div><div> Fernando<br><div>
<span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div><br class="Apple-interchange-newline">______________________________________________</div><div><div> </div><div>Fernando Colchero</div><div><br></div><div>Max Planck Institute for Demographic Research</div><div>Konrad Zuse Str. 1, 18057, Rostock, Germany</div><div>Tel: +49 (0) 381 2081 113</div><div>Fax: +49 (0) 381 2081 529</div><div><div>E-mail: <a href="mailto:Colchero@demogr.mpg.de">Colchero@demogr.mpg.de</a></div></div><div>______________________________________________</div></div><div><br></div><div><br></div></div></span><br class="Apple-interchange-newline"></span><br class="Apple-interchange-newline"></span>
</div>
<br><div><div>On Nov 3, 2011, at 3:42 PM, Cliff Cunningham wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Dear Fernando,<div><br><div><span class="Apple-tab-span" style="white-space:pre"> </span>I have the program up and running for 50k iterations.</div><div><br></div><div><span class="Apple-tab-span" style="white-space:pre"> </span>I tried to set it up for 1K iterations, but I kept getting an error message that "nburnin is larger than niter", though I had set it to be smaller:</div><div><br></div><div><div>out <- basta(object = Males.dat$newData, studyStart = 1978, studyEnd = 1982, nburnin=100, niter=1000, nsim=6, parallel=TRUE, ncpus=6,</div><div>model = "LO", shape = "bathtub")</div></div><div><br></div><div><span class="Apple-tab-span" style="white-space:pre"> </span>Owen Jones looked at my run and thought it might be a bug.</div><div><br></div><div><div>
<div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span></div><div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span>All the best!</div><div style="font-size: 12px; "><br></div><div style="font-size: 12px; "> <span class="Apple-converted-space"> </span><span class="Apple-tab-span" style="white-space: pre; "> </span>Cliff Cunningham</div><div style="font-size: 12px; "><br></div><div style="font-size: 12px; "><br class="Apple-interchange-newline"> Professor</div><div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span>Biology Department</div><div style="font-size: 12px; "> <span class="Apple-tab-span" style="white-space: pre; "> </span>Duke University</div><div style="font-size: 12px; "> 130 Science Drive</div><div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span>Durham NC 27708<br class="webkit-block-placeholder"></div><div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span>Phone 919-660-7356<br></div><div style="font-size: 12px; "><br></div><div style="font-size: 12px; "><a href="http://www.biology.duke.edu/cunningham">http://www.biology.duke.edu/cunningham</a></div><div style="font-size: 12px; "><br class="khtml-block-placeholder"></div><br class="Apple-interchange-newline"><br class="Apple-interchange-newline">
</div>
<br></div></div></div>_______________________________________________<br>Basta-users mailing list<br><a href="mailto:Basta-users@lists.r-forge.r-project.org">Basta-users@lists.r-forge.r-project.org</a><br>https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/basta-users<br></blockquote></div><br></div>
<p><span style="font-family:'Arial';font-size:8pt;">----------</span></p>
<p><span style="font-family:'Arial';font-size:8pt;">This mail has been sent through the MPI for Demographic Research. Should you receive a mail that is apparently from a MPI user without this text displayed, then the address has most likely been faked. If you are uncertain about the validity of this message, please check the mail header or ask your system administrator for assistance.</span></p>
<p><span style="font-family:'Arial';font-size:8pt;"> </span></p></body></html>