[adegenet-forum] Could adegenet be modified to accept allele frequencies as input data?

[Angela Fuentes Pardo]

Hi there,

My dataset consists of allele frequencies of millions of SNPs for >10 populations (I don't have individual genotype data). adegenet requires individual genotypes as input data, but considering many population genetic tests are based on allele frequencies, I wanted to ask if there is any possibility that adegenet could have a function that accepts population allele frequencies as input data. I am mostly interested on conducting PCA and DAPC tests.

Thanks


--
Angela P. Fuentes-Pardo. Biologist, Ph.D. candidate
Ruzzante Lab, Department of Biology
Dalhousie University, Halifax, Canada, B3H 4R2
http://fuentespardo.weebly.com
<http://apfuentesp.weebly.com/><http://apfuentespardo.weebly.com/><http://apfuentespardo.weebly.com/><http://apfuentesp.weebly.com/>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.r-forge.r-project.org/pipermail/adegenet-forum/attachments/20171030/dca66bc9/attachment.html>