[adegenet-forum] Question about seploc error: "Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent"

[Roman Luštrik]

Sorry for the late reply. Can you make a small subset of your data which demonstrates this problem? 

---- 
In god we trust, all others bring data. 


From: "Rob Syme" <rob.syme at gmail.com> 
To: adegenet-forum at lists.r-forge.r-project.org 
Cc: "muhammadqudratullah farooqi" <muhammadqudratullah.farooqi at uwa.edu.au> 
Sent: Monday, November 20, 2017 10:41:11 AM 
Subject: [adegenet-forum] Question about seploc error: "Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent" 

In trying to run seploc on a genind object (output from gl.read.silicodart from dartR v0.93), I get the error: 
>is.genind(gl) 
[1] TRUE 
> seploc(gl) 
Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent 
10. 
	
`colnames<-`(`*tmp*`, value = seq(ncol(tab))) 
9. 
	
.local(.Object, ...) 
8. 
	
initialize(value, ...) 
7. 
	
initialize(value, ...) 
6. 
	
new("genind", ...) 
5. 
	
FUN(X[[i]], ...) 
4. 
	
lapply(kX, genind, pop = x at pop, prevcall = prevcall, ploidy = x at ploidy, type = x at type) 
3. 
	
.local(x, ...) 
2. 
	
seploc(gl) 
1. 
	
seploc(gl) 

Is there any way we can track down what peculiarity of our input data is causing the error? 

Thanks 

Rob Syme 
Curtin University 

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