[adegenet-forum] repooling random rows from genind objects

[Spencer Bruce]

Error message:

Error in sample.int(length(x), size, replace, prob) :
  invalid first argument

On Thu, Oct 23, 2014 at 10:50 AM, Jombart, Thibaut <t.jombart at imperial.ac.uk
> wrote:

>
> Hello,
> hard to figure out what is wrong without the error message..
> Cheers
> Thibaut
>  ------------------------------
> *From:* adegenet-forum-bounces at lists.r-forge.r-project.org [
> adegenet-forum-bounces at lists.r-forge.r-project.org] on behalf of Spencer
> Bruce [goatsrunfaster at gmail.com]
> *Sent:* 23 October 2014 15:29
> *To:* adegenet-forum at lists.r-forge.r-project.org
> *Subject:* [adegenet-forum] repooling random rows from genind objects
>
>   Hello All!
>
>  I have three seperate populations as genind objects. What I would like
> to do is pull a certain number of random individuals from each, to form a
> new single genind population.
>
>  I would then like individuals from this new genind population to mate
> randomly, producing another genind object which would contain their
> offspring.
>
>  Below is the code I came up with (which does not work):
>
>  Year1 <- repool(F1[sample(nrow(F1), 500), ], pop1[sample(nrow(pop1),
> 750), ], pop2[sample(nrow(pop2), 750), ], n=2000)
>
>  Year2 <- hybridize(Year1[sample(nrow(Year1), 1000), ],
> Year1[sample(nrow(Year1), 1000), ], n=2000)
>
>
>  any help would be greatly appreciated!
>
>  Best,
> Spencer
>
>  --
> Spencer A Bruce
> 200 Washington St.
> Troy, NY 12180
> 518 225 0787
>



-- 
Spencer A Bruce
200 Washington St.
Troy, NY 12180
518 225 0787
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