[adegenet-forum] R commanding for Cluster finding and DAPC from FASTA mtDNA data file

Charles Lyimo lyimo.charles at googlemail.com
Wed Jan 15 15:55:01 CET 2014


Hi members,
I have FASTA file of mtDNA sequence data for 60 chicken populations
from different continents. I want to find the cluster and plot the
Discriminant Analysis of principal Components of these chicken
populations using R. I am requesting the assistance of comand lines
that I should use for these kind of analyses.

Thank you in advance.

Regards,
Lyimo

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Sokoine University of Agriculture (SUA),
Faculty of Sciences, Dept. of Biological Sciences,
P.O. Box 3038, Morogoro, Tanzania


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