[adegenet-forum] xvalDapc and Missing data
jryan.daniels at gmail.com
Tue Jul 30 22:12:17 CEST 2013
(Windows Vista, R 3.0.0)
I've read in a genepop file with microsatellite data (diploid, 9 loci, 120
samples, 8 populations) and coverted it to genind.
I was trying to use the xvalDapc function but I received the following
Error in dudi.pca(x, nf = n.pca.max, scannf = FALSE, center = center, :
na entries in table
I've checked, there are "NA"s and they correspond to my samples with
I couldn't find anything on the web on how to deal with missing data for
this function but I saw Thibaut suggested replacing NA's with
uninformative mean values.
Would this solution be permissible for this function and this type of data?
Thank you in advance
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