[adegenet-forum] Adegenet error when runing R in a MAcos Leopard 10.6.6

[Jombart, Thibaut]

Hello, 

I think this is issue #4 in the FAQ on adegenet website (http://adegenet.r-forge.r-project.org/). Try:
install.packages("adegenet", dep=TRUE)

Best regards

Thibaut

________________________________________
From: adegenet-forum-bounces at r-forge.wu-wien.ac.at [adegenet-forum-bounces at r-forge.wu-wien.ac.at] On Behalf Of Susanna Lopez-Legentil [slopez at ub.edu]
Sent: 03 February 2011 17:39
To: adegenet-forum at r-forge.wu-wien.ac.at
Subject: [adegenet-forum] Adegenet error when runing R in a MAcos Leopard       10.6.6

Hello,

I am quite new with R and adegenet and so far I managed to download adegenet and install it.
But when I ask R to open the library it responds its loaded but with some errors, and it does not recognize the import2genind function... (see below)

> library(adegenet)
Loading required package: MASS
   ==========================
    adegenet 1.2-9 is loaded
   ==========================

 - to start, type '?adegenet'
 - to browse adegenet website, type 'adegenetWeb()'
 - to post questions/comments: adegenet-forum at lists.r-forge.r-project.org


Error in as.environment(pos) :
  no item called "newtable" on the search list
In addition: Warning message:
In objects(newtable, all.names = TRUE) :
  ‘newtable’ converted to character string
Error in as.environment(pos) :
  no item called "newtable" on the search list
In addition: Warning message:
In objects(newtable, all.names = TRUE) :
  ‘newtable’ converted to character string
> styela=import2genind(file="input.gen")
Error: could not find function "import2genind"


Is this a Mac bug or am I doing something wrong?
Thanks a lot for your help

Susanna
Susanna López-Legentil
Spain
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